bcftools convert to vcf (version 1.15.1+galaxy3)

convert from:

Tabular Variant Data:

Reference sequence and samples are required

Choose the source for the reference genome:

Reference genome:

Samples:

Comma-separated list of samples to annotate (or exclude) or - to include all samples

Invert Samples:

Inverts the query/filtering applied by Samples (adds "^" prefix to exclude)

Samples file:

File of samples to include

Invert Samples file:

inverts the query/filtering applied by Samples file

Columns:

List of columns in the annotation file, e.g. CHROM,POS,REF,ALT,-,INFO/TAG. See man page for details

output_type:

bcftools convert plugin

Converts other variant formats to vcf. See man page for file formats details.