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Biobox add taxid (version 1.2+galaxy0)

Input biobox file:

This file can be generated with the utility tool from CAMI AMBER named convert to biobox

Select typ of input:

Input ConitgID2TaxID file:

This input comes from Kraken2

Select the column where the ContigID are stated:

Select the column where the TaxID are stated:

USAGE OF THIS TOOL

This tool can be used to add the TaxID column to a biobox file.

INPUTS

A biobox file. This file can be generated with the CAMI AMBER utility Tool named 'convert to biobox'

Either a Contig2TaxID file which is generated from Kraken2 (the classification file from Kraken2) or a BinID2TaxID which has to be done manualy

Example for a BinID2TaxID file
#BinID   TaxID
test1   11056
test2   444944
ABC 888
OUTPUT

A CAMI AMBER biobox file with a taxid column