usage: prince [-h] [-bo BOOST_OUTPUT] [-to TARGET_OUTPUT] [-tmp TEMPLATES] [-tf TARGET_FILE] [-bf BOOSTING_FILE] [-k K] [-cn COPYNUMBER]

Prince Options.

optional arguments:

-h, --help	Show this help message and exit
-bo, --boost_output
	Output file for training data / training data used to predict copy numbers for queries
-to, --target_output
	Output file for query copy number predictions
-tmp, --templates
	VNTR templates. Default is for M.TB
-tf, --target_file
	Target genome names in a text file
-bf, --boosting_file
	Training genome file names in a text file
-k, --k	Kmer size used during read recruitment
-cn, --copynumber
	Copy number used for training genome