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Split.abund (version 1.39.5.0)

fasta - Fasta:

cutoff - Cutoff parameter is used to qualify what is abundant and rare.:

Type to screen:

list - OTU List:

label - OTU Labels:

Select OTU Labels to filter out all but selected labels

Parse a group file into abundant and rare groups? (only possible if name or list file supplied):

accnos - Produce rare and abundant Accession outputs:

Output logfile?:

Mothur Overview

Mothur is a comprehensive suite of tools for microbial ecology community. It is initiated by Dr. Patrick Schloss and his software development team in the Department of Microbiology and Immunology at The University of Michigan. For more information, see Mothur-Wiki.

Command Documentation

The split.abund command reads a fasta file and a list or a name file and splits the sequences into rare and abundant groups.