pyCalculateChromosomeLengths
pyCalculateChromosomeLengths is part of the pyCRAC package. Takes a genome sequence in fasta or tab format and generates a tab-delimited file showing chromosome name and chromosome length.
Parameter list
Options:
-f chromosomes.fasta, --input_file=chromosomes.fasta provide the name and path of your fasta or tab genomic sequence file. Default is standard input. --file_type=fasta provide the file type (fasta or tab). Default is fasta