What it does

The Root Mean Square Fluctuation (RMSF) provides a measure of conformational variance i.e. which portions of structure are fluctuating from their mean structure the most (or least). This tool can calculate and plot the RMSF of the selected section of the protein (or other molecule).

Input

• Input file in PDB format
• Input file in DCD format

Output

• Image (as PNG) of the RMSF plot
• Tab-separated file of raw data