The hmmconvert utility converts an input profile file to different HMMER formats.
By default, the input profile can be in any HMMER format, including old/obsolete formats from HMMER2, ASCII or binary; the output profile is a current HMMER3 ASCII format.
This Galaxy tool relies on HMMER3 from http://hmmer.janelia.org/ Internally the software is cited as:
# hmmscan :: search sequence(s) against a profile database # HMMER 3.1 (February 2013); http://hmmer.org/ # Copyright (C) 2011 Howard Hughes Medical Institute. # Freely distributed under the GNU General Public License (GPLv3). # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
The wrappers were written by Eric Rasche and is licensed under Apache2. The documentation is copied from the HMMER3 documentation.