FASTAptamer-Enrich requires FASTA formatted input files generated by FASTAptamer-Count or FASTAptamer-Cluster.

FASTAptamer-Enrich rapidly calculates "fold-enrichment" values for each sequence across two or three input files. Output is provided as a tab-delimited file and is formatted to include sequence composition, length, rank, reads, reads per million (RPM), cluster information (if available) and enrichment values for each sequence.

An optional threshold filter can be applied to exclude sequences with total reads per million (across all input populations) less than the number supplied.

Enrichment is calculated by dividing reads per million of y/x (and z/y and z/x, if a third input file is specified).

For more information on FASTAptamer, visit our website.

FASTAptamer is distributed under a GNU GPL v3.0 license. For complete license click here.