Galaxy | Tool Preview
Repository Actions
View repository
View change log
Browse repository tip files
Download as a .tar.gz file
Download as a .tar.bz2 file
Download as a zip file
Chado load GO annotation (version 2.3.9+galaxy0)
Chado Database:
If you select 'Remote database' make sure credentials are defined in environment variables
GO annotation:
Path to the GO annotation file to load
Analysis:
Organism:
Query type:
The feature type (e.g. 'gene', 'mRNA', 'polypeptide', 'contig') of the query. It must be a valid Sequence Ontology term.
Match On Name:
Match features using their name instead of their uniquename
Identifier column:
Column containing the feature identifiers.
GO column:
Column containing the GO id.
Name regular expression:
Regular expression to extract the feature name from the input file (first capturing group will be used).
Skip Missing:
Skip lines with unknown features or GO id instead of aborting everything.
Run this only after the following dataset is ready:
Use this if you want to delay the job execution until some data is already loaded. The selected dataset will not be used for anything else.
Load GO annotation from a tabular file