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est2genome (version 5.0.0.1)
EST sequence(s):
Genomic sequence:
Score for matching two bases:
Cost for mismatching two bases:
Cost for deleting a single base in either sequence, excluding introns:
Cost for an intron, independent of length:
Cost for an intron, independent of length and starting/ending on donor-acceptor sites:
Exclude alignments with scores below this threshold score:
Reverse the orientation of the EST sequence:
Use donor and acceptor splice sites:
Comparison mode:
Only best comparisons:
Shuffle:
Random number seed:
Show the alignment:
Alignment width:
The input dataset needs to be sequences.
You can view the original documentation
here
.