Galaxy | Tool Preview

ChiRA merge (version 1.4.30)
Matching read positions with greater than this fraction overlap are merged into a segment
Consider the alignments of a that read have at least longer than this value times the longest alignment for that read
Minimum fraction of BED entries/blockbuster blocks that must overlap inorder to merge
Minimum number of alignments to be present to output the merged a locus

What it does

This tool merges the overlapping aligned positions to define the read concentrated loci. If an annotation GTF file produced, the transcriptomic alignment positions are first converted to their corresponding genomic positions.