Galaxy |

Epifany (version 2.8+galaxy0)

Run tool in batch mode for -in:

Input: identification results:

select consensusxml,idxml data sets(s)

(Currently unused) Input: experimental design:

select tabular data sets(s)

Output type: auto detected by file extension but can be overwritten here:

Additionally calculate the target-decoy FDR on protein-level based on the posteriors:

Post-process inference output with greedy resolution of shared peptides based on the parent protein probabilities:

Also adds the resolved ambiguity groups to output

Set PSMs with probability higher than this to this maximum probability:

Parameters for the Algorithm sections

Parameters for the Algorithm section 0

Advanced Options

Advanced Options 0

Optional outputs: