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qiime demux subsample-paired (version 2019.4)

Subsample paired-end sequences without replacement.

Generate a random subsample of paired-end sequences containing approximately the fraction of input sequences specified by the fraction parameter. The number of output samples will always be equal to the number of input samples, even if some of those samples contain no sequences after subsampling.

Parameters

sequences : SampleData[PairedEndSequencesWithQuality]
The demultiplexed sequences to be subsampled.
fraction : Float % Range(0, 1, inclusive_start=False)
The fraction of sequences to retain in subsample.

Returns

subsampled_sequences : SampleData[PairedEndSequencesWithQuality]
The subsampled sequences.