Alpha diversity
Computes a user-specified alpha diversity metric for all samples in a
feature table.
Parameters
- table : FeatureTable[Frequency]
- The feature table containing the samples for which alpha diversity
should be computed.
- metric : Str % Choices('pielou_e', 'menhinick', 'mcintosh_e', 'doubles', 'chao1_ci', 'kempton_taylor_q', 'enspie', 'heip_e', 'michaelis_menten_fit', 'observed_otus', 'gini_index', 'dominance', 'osd', 'esty_ci', 'ace', 'berger_parker_d', 'lladser_ci', 'simpson_e', 'shannon', 'margalef', 'brillouin_d', 'robbins', 'simpson', 'fisher_alpha', 'singles', 'goods_coverage', 'mcintosh_d', 'chao1', 'lladser_pe', 'strong')
- The alpha diversity metric to be computed.
Returns
- alpha_diversity : SampleData[AlphaDiversity]
- Vector containing per-sample alpha diversities.