qiime emperor biplot (version 2019.4)

--i-biplot: ARTIFACT PCoAResults % Properties('biplot') The principal coordinates matrix to be plotted. [required]:

--p-ignore-missing-samples: --p-no-ignore-missing-samples This will suppress the error raised when the coordinates matrix contains samples that are not present in the metadata. Samples without metadata are included by setting all metadata values to: 'This sample has no metadata'. This flag is only applied if at least one sample is present in both the coordinates matrix and the metadata. [default: False]:

--p-number-of-features: INTEGER Range(1, None) The number of most important features (arrows) to display in the ordination. [default: 5]:

--m-sample-metadata-file [required]s

--m-sample-metadata-file [required] 0

--m-feature-metadata-files

--m-feature-metadata-file 0

Visualize and Interact with Principal Coordinates Analysis Biplot

Generates an interactive ordination biplot where the user can visually integrate sample and feature metadata.

Parameters

biplot : PCoAResults % Properties('biplot'): The principal coordinates matrix to be plotted.
sample_metadata : Metadata: The sample metadata
feature_metadata : Metadata, optional: The feature metadata (useful to manipulate the arrows in the plot).
ignore_missing_samples : Bool, optional: This will suppress the error raised when the coordinates matrix contains samples that are not present in the metadata. Samples without metadata are included by setting all metadata values to: "This sample has no metadata". This flag is only applied if at least one sample is present in both the coordinates matrix and the metadata.
number_of_features : Int % Range(1, None), optional: The number of most important features (arrows) to display in the ordination.

Returns

visualization : Visualization