Visualize and Interact with Principal Coordinates Analysis Plots
Generates an interactive ordination plot where the user can visually
integrate sample metadata.
Parameters
- pcoa : PCoAResults
- The principal coordinates matrix to be plotted.
- metadata : Metadata
- The sample metadata.
- custom_axes : List[Str], optional
- Numeric sample metadata columns that should be included as axes in the
Emperor plot.
- ignore_missing_samples : Bool, optional
- This will suppress the error raised when the coordinates matrix
contains samples that are not present in the metadata. Samples without
metadata are included by setting all metadata values to: "This sample
has no metadata". This flag is only applied if at least one sample is
present in both the coordinates matrix and the metadata.
Returns
visualization : Visualization