Visualize and Interact with a procrustes plot
Plot two procrustes-fitted matrices
Parameters
- reference_pcoa : PCoAResults
- The reference ordination matrix to be plotted.
- other_pcoa : PCoAResults
- The "other" ordination matrix to be plotted (the one that was fitted to
the reference).
- metadata : Metadata
- The sample metadata.
- custom_axes : List[Str], optional
- Numeric sample metadata columns that should be included as axes in the
Emperor plot.
- ignore_missing_samples : Bool, optional
- This will suppress the error raised when the coordinates matrix
contains samples that are not present in the metadata. Samples without
metadata are included by setting all metadata values to: "This sample
has no metadata". This flag is only applied if at least one sample is
present in both the coordinates matrix and the metadata.
Returns
visualization : Visualization