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qiime phylogeny filter-table (version 2019.4)

Remove features from table if they're not present in tree.

Remove features from a feature table if their identifiers are not tip identifiers in tree.

Parameters

table : FeatureTable[Frequency]
Feature table that features should be filtered from.
tree : Phylogeny[Rooted | Unrooted]
Tree where tip identifiers are the feature identifiers that should be retained in the table.

Returns

filtered_table : FeatureTable[Frequency]
The resulting feature table.