Galaxy |

aurora_skewer (version 2.0.1)

First reads:

Second reads:

If it is single end reads, ignore this input field and use the "first reads" field only.

Adapter sequence/file for the first reads.:

Adapter sequence/file for the second reads:

trimming mode:

Maximum allowed error rate:

Maximum allowed indel error rate:

The valid range of indel error rate is [0, maximum allowed error rate]

3’ end quality trimming:

Reads filtering by average quality:

Minimum read length allowed after trimming:

Advanced options

Advanced options 0