usage: sixgill_makefasta [-h] --out OUT --type {aa,peptide}

[--missedcleavages MISSEDCLEAVAGES] [--minpeptidelength MINPEPTIDELENGTH] [--debug] metapeptidedbfile

Build a fasta database from a metapeptide database. Either nucleotide or amino acid.

positional arguments:

metapeptidedbfile input metapeptide database file

optional arguments:

-h, --help	show this help message and exit
--out OUT	output file

--type {aa,peptide} database type --missedcleavages MISSEDCLEAVAGES

missed cleavages (for type peptide only)

--minpeptidelength MINPEPTIDELENGTH
	minimum peptide length (for type peptide only)
--debug	Enable debug logging