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AddCommentsToBam (version 3.1.1.0)
If empty, upload or import a SAM/BAM dataset
Comments
Comment 0
Setting stringency to SILENT can improve performance when processing a BAM file in which variable-length data (read, qualities, tags) do not otherwise need to be decoded.

Purpose

Adds one or more comments (@CO) to the header of a specified BAM dataset.


Dataset collections - processing large numbers of datasets at once

This will be added shortly


Inputs, outputs, and parameters

Either a SAM file or a BAM file must be supplied. Galaxy automatically coordinate-sorts all uploaded BAM files.

From Picard documentation( http://broadinstitute.github.io/picard/):

COMMENT=String
C=String          Comments to add to the BAM file  This option may be specified 0 or more times.

Additional information

Additional information about Picard tools is available from Picard web site at http://broadinstitute.github.io/picard/ .