Galaxy |

Remove.seqs (version 1.39.5.0)

accnos - Accession Names of sequences to be removed:

fasta - Fasta Sequences:

qfile - Fasta Quality:

fastq:

name - Sequences Name reference:

group - Sequences Groups:

alignreport - Align Report:

list - OTU List:

taxonomy - Taxonomy:

count - a count_table:

generated by count.seqs

dups - Apply to duplicates:

Output logfile?:

Mothur Overview

Mothur is a comprehensive suite of tools for microbial ecology community. It is initiated by Dr. Patrick Schloss and his software development team in the Department of Microbiology and Immunology at The University of Michigan. For more information, see Mothur-Wiki.

Command Documentation

The remove.seqs command takes a list of sequence names and either a fasta, name, group, list, align.report or taxonomy file to generate a new file that does not contain the sequences in the list. This command may be used in conjunction with the list.seqs command to help screen a sequence collection.