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QualityControl (version 2.8+galaxy0)

ConsensusXML input, generated by FeatureLinke:

select consensusxml data sets(s)

Run tool in batch mode for -in_raw:

MzML input (after InternalCalibration, if available):

select mzml data sets(s)

Run tool in batch mode for -in_postFDR:

FeatureXMLs after FDR filtering:

select featurexml data sets(s)

Proteins considered contaminants:

select fasta data sets(s)

Run tool in batch mode for -in_trafo:

trafoXMLs from MapAligners:

select trafoxml data sets(s)

If a Path is given, a MQEvidence txt-file will be created in this directory:

If the directory does not exist, it will be created as well

Fragment Mass Error settings

Fragment Mass Error settings 0

MS2 ID Rate settings

MS2 ID Rate settings 0

Advanced Options

Advanced Options 0

Optional outputs:

Computes various QC metrics from many possible input files (only the consensusXML is required). The more optional files you provide, the more metrics you get.

For more information, visit http://www.openms.de/doxygen/release/2.8.0/html/TOPP_QualityControl.html