Allows to keep or remove samples from a VCF file.
Example:
Selecting NA00001 and NA00003 from the following VCF line:
#CHROM POS ID REF ALT QUAL FILTER INFO FORMAT NA00001 NA00002 NA00003 20 1110696 rs6040355 A G,T 67 PASS NS=2;DP=10;AF=0.333,0.667;AA=T;DB GT:GQ:DP:HQ 1|2:21:6:23,27 2|1:2:0:18,2 2/2:35:4:.,.
will, obviously, remove NA00002:
#CHROM POS ID REF ALT QUAL FILTER INFO FORMAT NA00001 NA00003 20 1110696 rs6040355 A G,T 67 PASS NS=2;DP=10;AF=0.333,0.667;AA=T;DB GT:GQ:DP:HQ 1|2:21:6:23,27 2/2:35:4:.,.
Vcfselectsamples is based on vcfkeepsamples/vcfremovesamples utilities from VCFlib toolkit developed by Erik Garrison (https://github.com/ekg/vcflib).