Galaxy |

FeatureFinderIdentification (version 2.8+galaxy0)

Input file: LC-MS raw data:

select mzml data sets(s)

Input file: Peptide identifications derived directly from 'in':

select idxml data sets(s)

Input file: 'External' peptide identifications:

(e.g. from aligned runs) select idxml data sets(s)

Whether decoy peptides should be quantified (true) or skipped (false):

Parameters for ion chromatogram extractions

Parameters for ion chromatogram extraction 0

Parameters for detecting features in extracted ion chromatograms

Parameters for detecting features in extracted ion chromatograms 0

Parameters for scoring features using a support vector machine (SVM)s

Parameters for scoring features using a support vector machine (SVM) 0

Parameters for fitting elution models to features

Parameters for fitting elution models to features 0

Parameters for fitting exps

Parameters for fitting exp 0

Advanced Options

Advanced Options 0

Optional outputs:

Detects features in MS1 data based on peptide identifications.