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pRESTO Partition (version 0.6.2+galaxy0)
FASTQ file of sequences with barcodes/UMIs in an annotation.
Name of the numeric annotation field to partition by.
Numeric threshold. File will be partitions be into n < threshold and n >= threshold.

Uses pRESTO SplitSeq.py group to partition a file of sequences into two files. The input file is split based on a numeric annotation field to yield one file which contains all sequences with the field value less than the provided threshold and a second file with all sequences with the field value greater than or equal to the threshold.

See the pRESTO online help for more information.

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Note about limitations of pRESTO tools within Galaxy:

pRESTO tools in galaxy have the following limitations vs. when run at the command line: