| Previous changeset 3:5a6d8b425413 (2015-11-10) Next changeset 5:90f33c5ef3af (2015-11-10) |
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Commit message:
Uploaded |
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added:
tool_dependencies.xml |
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| diff -r 5a6d8b425413 -r 013a91415eab tool_dependencies.xml --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool_dependencies.xml Tue Nov 10 11:47:15 2015 -0500 |
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| @@ -0,0 +1,19 @@ +<?xml version="1.0"?> +<tool_dependency> + <set_environment version="1.0"> + <environment_variable name="R_SCRIPT_PATH" action="set_to">$REPOSITORY_INSTALL_DIR/bubblebeam</environment_variable> + </set_environment> + <package name="R" version="2.15.1"> + <install version="1.0"> + <actions> + <action type="shell_command">git clone http://github.com/bornea/Saint_On_Galaxy</action> + <action type="shell_command">unzip SAINTexpress_v3.6.1__2015-05-03.zip</action> + <action type="shell_command">./make -j</action> + <action type="set_environment"> + <environment_variable name="PATH" action="prepend_to">$REPOSITORY_INSTALL_DIR/Saint_On_Galaxy/SAINTexpress_v3.6.1__2015-05-03/bin</environment_variable> + </action> + </actions> + </install> + <readme></readme> + </package> +</tool_dependency> \ No newline at end of file |