| Previous changeset 0:f65530d07350 (2016-05-17) Next changeset 2:2de4be065de4 (2016-05-20) |
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Commit message:
planemo upload for repository https://github.com/portiahollyoak/Tools commit 41388a30836a24988ff78645b9446480c1c59990 |
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modified:
test-data/README |
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added:
test-data/breakdancer_config_X_100000 |
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| diff -r f65530d07350 -r 021a0f7ab3f6 test-data/README --- a/test-data/README Tue May 17 04:35:44 2016 -0400 +++ b/test-data/README Fri May 20 04:56:25 2016 -0400 |
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| @@ -1,10 +1,12 @@ This is a collection of test data to be used with breakdancer. It consists of: an alignment file -a output bed file +an output bed file -The details for the alignment file to be put into breakdancer are: +The input variables for the alignment file to be put into breakdancer are: mean:227 standard deviation:98 read length:125 sample:X_10000000_Hum1 + +All other variables are to be kept as defaults. |
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| diff -r f65530d07350 -r 021a0f7ab3f6 test-data/breakdancer_config_X_100000 --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/breakdancer_config_X_100000 Fri May 20 04:56:25 2016 -0400 |
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| @@ -0,0 +1,1 @@ +map:../HUM_BAM_dm6fasta/Hum1.bwa.bam mean:227 std:98 readlen:125 sample:HUM1 exe:samtools view |