| Previous changeset 8:45c57bf42470 (2017-10-20) Next changeset 10:e80720e27001 (2019-09-11) |
|
Commit message:
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/crossmap commit 23fab16cd40acbd5b0e9d640ed3858040db7a622 |
|
modified:
crossmap_gff.xml macros.xml |
| b |
| diff -r 45c57bf42470 -r 040eed862c91 crossmap_gff.xml --- a/crossmap_gff.xml Fri Oct 20 11:33:52 2017 -0400 +++ b/crossmap_gff.xml Thu May 24 19:10:01 2018 -0400 |
| b |
| @@ -1,4 +1,4 @@ -<tool id="crossmap_gff" name="CrossMap GFF" version="@WRAPPER_VERSION@-0"> +<tool id="crossmap_gff" name="CrossMap GFF" version="@WRAPPER_VERSION@"> <description>Convert genome coordinates or annotation files between genome assemblies</description> <macros> <import>macros.xml</import> @@ -16,7 +16,7 @@ > #end if -'${output}' +output ]]></command> <inputs> @@ -28,7 +28,7 @@ </inputs> <outputs> - <data name="output" format="gff" label="${tool.name} on ${on_string}" /> + <data name="output" format="gff" label="${tool.name} on ${on_string}" from_work_dir="output" /> </outputs> <tests> @@ -74,7 +74,6 @@ independently, and we do NOT check if features originally belonging to the same gene were converted into the same gene. - If user want to liftover gene annotation files, use BED12 format. - ]]></help> <citations> |
| b |
| diff -r 45c57bf42470 -r 040eed862c91 macros.xml --- a/macros.xml Fri Oct 20 11:33:52 2017 -0400 +++ b/macros.xml Thu May 24 19:10:01 2018 -0400 |
| b |
| @@ -2,11 +2,11 @@ <macros> <xml name="requirements"> <requirements> - <requirement type="package" version="0.2.5">crossmap</requirement> + <requirement type="package" version="0.2.7">crossmap</requirement> <yield/> </requirements> </xml> - <token name="@WRAPPER_VERSION@">0.2.5</token> + <token name="@WRAPPER_VERSION@">0.2.7</token> <xml name="stdio"> <stdio> <regex match="Aborted (core dumped)" source="stdout" level="fatal"/> |