| Previous changeset 6:359d85c79c6c (2014-02-10) Next changeset 8:b5955d7050d7 (2014-02-11) |
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Commit message:
Update output type |
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modified:
tool_dependencies.xml tophat_fusion_post.xml |
| b |
| diff -r 359d85c79c6c -r 052b357bb2b8 tool_dependencies.xml --- a/tool_dependencies.xml Mon Feb 10 12:55:22 2014 -0500 +++ b/tool_dependencies.xml Tue Feb 11 11:28:07 2014 -0500 |
| b |
| @@ -1,12 +1,12 @@ <?xml version="1.0"?> <tool_dependency> <package name="blast+" version="2.2.28"> - <repository changeset_revision="23b9ba41ad00" name="package_blast_plus_2_2_28" owner="iuc" toolshed="http://toolshed.g2.bx.psu.edu" /> + <repository name="package_blast_plus_2_2_28" owner="iuc"/> </package> <package name="tophat2" version="2.0.9"> - <repository changeset_revision="8549fd545473" name="package_tophat2_2_0_9" owner="devteam" toolshed="http://toolshed.g2.bx.psu.edu" /> + <repository name="package_tophat2_2_0_9" owner="devteam"/> </package> <package name="bowtie" version="0.12.7"> - <repository changeset_revision="028d22e7b70f" name="package_bowtie_0_12_7" owner="devteam" toolshed="http://toolshed.g2.bx.psu.edu" /> + <repository name="package_bowtie_0_12_7" owner="devteam"/> </package> </tool_dependency> |
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| diff -r 359d85c79c6c -r 052b357bb2b8 tophat_fusion_post.xml --- a/tophat_fusion_post.xml Mon Feb 10 12:55:22 2014 -0500 +++ b/tophat_fusion_post.xml Tue Feb 11 11:28:07 2014 -0500 |
| b |
| @@ -49,7 +49,7 @@ </stdio> <outputs> - <data format="txt" name="results_txt" label="${tool.name} on ${on_string}: text results" from_work_dir="tophatfusion_out/result.txt"/> + <data format="tabular" name="results_txt" label="${tool.name} on ${on_string}: text results" from_work_dir="tophatfusion_out/result.txt"/> <data format="html" name="results_html" label="${tool.name} on ${on_string}: html results" from_work_dir="tophatfusion_out/result.html"/> </outputs> </tool> |