| Previous changeset 5:f7ebd1b4783b (2018-09-15) Next changeset 7:bfdc6a7ffd3a (2021-04-22) |
|
Commit message:
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/uniprot_rest_interface commit f7a71c09b68d85a73a7ce761b4e64d5de29daee0 |
|
modified:
uniprot.xml |
| b |
| diff -r f7ebd1b4783b -r 054483e27a35 uniprot.xml --- a/uniprot.xml Sat Sep 15 10:23:35 2018 -0400 +++ b/uniprot.xml Sun Sep 16 13:41:08 2018 -0400 |
| [ |
| @@ -1,20 +1,20 @@ -<tool id="uniprot" name="UniProt" version="0.1"> +<tool id="uniprot" name="UniProt" version="0.2"> <description>ID mapping and retrieval</description> <macros> <import>macros.xml</import> </macros> <requirements> - <requirement type="package" version="2.7">requests</requirement> + <requirement type="package" version="2.19.1">requests</requirement> </requirements> <version_command>echo "UniProt ID mapping for Galaxy in version 0.1"</version_command> <command detect_errors="aggressive"><![CDATA[ - cut -f ${id_column} $infile > id_file.tabular && + cut -f ${id_column} '$infile' > id_file.tabular && - $__tool_directory__/uniprot.py + '$__tool_directory__/uniprot.py' #if $tool.tool_choice == "retrieve": - retrieve -f $tool.format $infile ./output + retrieve -f $tool.format id_file.tabular ./output #elif $tool.tool_choice == "map": map |