| Next changeset 1:673718067538 (2016-05-16) |
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Commit message:
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty |
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added:
PeptideShaker_PSM_REPORT_to_NOVEL_peptides.ga repository_dependencies.xml |
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| diff -r 000000000000 -r 05ab719b9b93 PeptideShaker_PSM_REPORT_to_NOVEL_peptides.ga --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/PeptideShaker_PSM_REPORT_to_NOVEL_peptides.ga Fri May 13 09:34:49 2016 -0400 |
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| b'@@ -0,0 +1,1312 @@\n+{\n+ "a_galaxy_workflow": "true", \n+ "annotation": "", \n+ "format-version": "0.1", \n+ "name": "ASMS 2016: Session 3: Workflow for PeptideShaker PSM REPORT to NOVEL peptides", \n+ "steps": {\n+ "0": {\n+ "annotation": "", \n+ "content_id": null, \n+ "id": 0, \n+ "input_connections": {}, \n+ "inputs": [\n+ {\n+ "description": "", \n+ "name": "PSM REPORT from PeptideShaker Output"\n+ }\n+ ], \n+ "label": null, \n+ "name": "Input dataset", \n+ "outputs": [], \n+ "position": {\n+ "left": 173.078125, \n+ "top": 223.53125\n+ }, \n+ "tool_errors": null, \n+ "tool_id": null, \n+ "tool_state": "{\\"name\\": \\"PSM REPORT from PeptideShaker Output\\"}", \n+ "tool_version": null, \n+ "type": "data_input", \n+ "uuid": "57ddf9d9-243a-494e-ab80-9e4e847b1bb3", \n+ "workflow_outputs": [\n+ {\n+ "label": null, \n+ "output_name": "output", \n+ "uuid": "b766949c-89c0-4596-90c9-5a7cc2e6ba9f"\n+ }\n+ ]\n+ }, \n+ "1": {\n+ "annotation": "", \n+ "content_id": "Remove beginning1", 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"left": 2116.03125, \n+ "top": 520\n+ }, \n+ "post_job_actions": {\n+ "RenameDatasetActionout_file1": {\n+ "action_arguments": {\n+ "newname": "PSM REPORT of PEPTIDES corresponding to novel proteoforms"\n+ }, \n+ "action_type": "RenameDatasetAction", \n+ "output_name": "out_file1"\n+ }\n+ }, \n+ "tool_errors": null, \n+ "tool_id": "Cut1", \n+ "tool_state": "{\\"columnList\\": \\"\\\\\\"c1-c20\\\\\\"\\", \\"input\\": \\"null\\", \\"delimiter\\": \\"\\\\\\"T\\\\\\"\\", \\"__rerun_remap_job_id__\\": null, \\"__page__\\": 0}", \n+ "tool_version": "1.0.2", \n+ "type": "tool", \n+ "uuid": "dd3616b1-17fb-403c-86c5-49364a33dfa6", \n+ "workflow_outputs": [\n+ {\n+ "label": null, \n+ "output_name": "out_file1", \n+ "uuid": "95e9b117-1291-4787-b3f3-ca968f15178d"\n+ }\n+ ]\n+ }\n+ }, \n+ "uuid": "19b7ca0f-ca39-496a-b727-af2b6b63d7e7"\n+}\n\\ No newline at end of file\n' |
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| diff -r 000000000000 -r 05ab719b9b93 repository_dependencies.xml --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/repository_dependencies.xml Fri May 13 09:34:49 2016 -0400 |
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| @@ -0,0 +1,10 @@ +<?xml version="1.0"?> +<repositories description="This workflow requires a number of different repositories."> + <repository changeset_revision="0b4e36026794" name="tabular_to_fasta" owner="devteam" toolshed="https://toolshed.g2.bx.psu.edu" /> + <repository changeset_revision="de2db1bdfbf8" name="fasta_compute_length" owner="devteam" toolshed="https://toolshed.g2.bx.psu.edu" /> + <repository changeset_revision="c8cd0a03db49" name="fasta_filter_by_length" owner="devteam" toolshed="https://toolshed.g2.bx.psu.edu" /> + <repository changeset_revision="9ea374bb0350" name="regex_find_replace" owner="jjohnson" toolshed="https://toolshed.g2.bx.psu.edu" /> + <repository changeset_revision="a51980bc0ffe" name="blast_plus_remote_blastp" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" /> + <repository changeset_revision="5da5dcc5e13a" name="blastxml_to_tabular_selectable" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" /> + <repository changeset_revision="626658afe4cb" name="column_maker" owner="devteam" toolshed="https://toolshed.g2.bx.psu.edu" /> +</repositories> |