| Previous changeset 0:eedbe32980bb (2015-06-21) Next changeset 2:b5df930313cc (2015-06-22) |
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Commit message:
planemo upload for repository https://bitbucket.org/drosofff/gedtools/ |
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modified:
oases_optimiser.xml |
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added:
test-data/input.fa test-data/output.fa |
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| diff -r eedbe32980bb -r 070f9de358fc oases_optimiser.xml --- a/oases_optimiser.xml Sun Jun 21 14:38:06 2015 -0400 +++ b/oases_optimiser.xml Sun Jun 21 15:05:17 2015 -0400 |
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| @@ -45,6 +45,14 @@ <outputs> <data format="fasta" name="transcripts" label="${tool.name} on ${on_string}: Denovo assembled transcripts"/> </outputs> + <tests> + <test> + <param name="input" value="input.fa" ftype="fasta"/> + <param name="start_hash_length" value="15" /> + <param name="end_hash_length" value="35" /> + <output name="transcripts" file="output.fa"/> + </test> + </tests> <help> **Oases Optimiser Overview** |
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| diff -r eedbe32980bb -r 070f9de358fc test-data/input.fa --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/input.fa Sun Jun 21 15:05:17 2015 -0400 |
| b |
| b'@@ -0,0 +1,57730 @@\n+>1_636\n+TATTTTGATGCTGATTATAAGA\n+>2_374\n+ATTCCGAAGGTTATGAACGGACT\n+>3_296\n+CTGAATGGAAATGTAGATAATAC\n+>4_198\n+GTTAGTAGACAAGTTAGAAACT\n+>5_195\n+ATTTTGATGCTGATTATAAGA\n+>6_191\n+AATTTGGCTTTGAATGGAACACAAGT\n+>7_189\n+GACTAAGAAGGTTTTAAGA\n+>8_139\n+AATAGTAGTTAGTGAGGTAGGA\n+>9_138\n+AATCAAACAAACAAAAAGGGA\n+>10_135\n+GTCAATGGTTACTTTGCTAACGGA\n+>11_128\n+GCTTACACTCAAAGATTGGGA\n+>12_127\n+CATTATGGAATAGCGAAAGT\n+>13_125\n+ATTATTTTGATGCTGATTATAAGA\n+>14_116\n+GGTTGAAGACCGTACAAAGTTTAACT\n+>15_111\n+GAAGTAATATGTTGAGTT\n+>16_106\n+TTTGGTTCCGCGTTGTCGTCG\n+>17_105\n+GTATGTTAGGGGTATGGAAGT\n+>18_104\n+ATGGGAAGAGAATACATGGGA\n+>19_102\n+TTATTTTGATGCTGATTATAAGA\n+>20_101\n+GTAGAAGAACATTTTGATGAC\n+>21_98\n+TGTTTTCGTCTCCTGGGCGGA\n+>22_93\n+TGGTGGTTTTGTAGTATACCT\n+>23_91\n+CATCTGTCTGGATAGGTCGGC\n+>24_90\n+GGAACCGAAAATGGTATGGGA\n+>25_89\n+CTACCTATGGTAGCAATGGGA\n+>26_88\n+GTAGTTAGTGAGGTAGGA\n+>27_83\n+GATTGACGAGAGCTATGACTGGGT\n+>28_83\n+GAAATTTGTTCGACCGAACGGTT\n+>29_83\n+GATGGGAAATAGAATCTTGAG\n+>30_83\n+TGGATTGTAGATCAGTTGGTG\n+>31_81\n+ATAAATTGATCGATATGGATG\n+>32_81\n+GAGTTAGTAGACAAGTTAGAAACT\n+>33_80\n+TGATGAACTGCTGAGGGTTTG\n+>34_78\n+TTTGTAGGTCTGCACTAACTG\n+>35_78\n+GATAGGTACGGATTGAACTCC\n+>36_78\n+CTATTGATACGTATGTAGTC\n+>37_77\n+TATGGGTCTTTATAATCGTA\n+>38_76\n+GTATCGGAAGTGCCGAAGGGA\n+>39_76\n+CGATGTGTAGAACAAATCATA\n+>40_75\n+CCGTTGATGATTAAAATGGGA\n+>41_74\n+ATTGATACGTATGTAGTC\n+>42_73\n+CTCATACAATTTGCTTGAGGA\n+>43_72\n+TAGAATTGATTTTACACGTGA\n+>44_72\n+GTGCCATGTTTTTATCGTCTG\n+>45_72\n+CTAGAGATTAGAGATGTAGGA\n+>46_70\n+ATTGGTGGAAATGTTGTAGGA\n+>47_67\n+AATATTTCGTAATAAGAGGGA\n+>48_67\n+GTGTGATGAACTGCTGAGGGT\n+>49_66\n+AGTTAGTAGACAAGTTAGAAACT\n+>50_66\n+TTTTTGATGAAAAGTTGGATA\n+>51_66\n+GGTCTTTATAATCGTAAGGAA\n+>52_65\n+AGATGAATGCTGTTTTGGAGG\n+>53_64\n+GATTTTATATTTGGTCGAGC\n+>54_64\n+GAGTACAAACTCGAGTGGGGA\n+>55_64\n+AAAAGTATTGGATACATCCGA\n+>56_63\n+AGAACCGTGGGGTTAGGAA\n+>57_62\n+GAGTGGTGTTCTGATCAAAGA\n+>58_62\n+ATAGATCGTTGTAGCAATGGA\n+>59_62\n+TCATCTAATGATATCGATGTA\n+>60_61\n+TCAAGCAAATTGTATGAGGGA\n+>61_61\n+TGTATGCTTCTTTGTACGGGC\n+>62_61\n+TGGGTCTTTATAATCGTAAGG\n+>63_61\n+CAAACAGAACCTTGAATGGAG\n+>64_60\n+TTGAGAATAAAATTGTAGGGA\n+>65_60\n+TTTGATGAAAAGTTGGATAA\n+>66_59\n+ATTTCACTCAAAGACATGGTT\n+>67_59\n+TCCCCACGCGGGGAGTAGTGG\n+>68_58\n+TTTTGATGAAAAGTTGGATAA\n+>69_58\n+CTCCTACGGGTTTTACTCGGG\n+>70_58\n+CAATTTGTGCAAAAGTAGTGA\n+>71_58\n+TTGATGCTGATTATAAGAACT\n+>72_58\n+GTGGGTTTTGAAAGACAGA\n+>73_58\n+GTAGTTCGTAGACCATTGTGA\n+>74_58\n+ATTTCGCGTTTTGTAGAGATG\n+>75_58\n+CAAGAACAGTTGATCGAAGCA\n+>76_57\n+GGTCCCTTTTTGTTTGTTTGA\n+>77_56\n+TAGTAGAGTATCGGAAGTGCC\n+>78_56\n+ACGCGAAAGAACGATACGGGA\n+>79_56\n+CAGAACCTTGAATGGAGCATT\n+>80_56\n+ACAGAAAATATTTTAAAAGGA\n+>81_55\n+TCTATATCCTAGCTCGCTAGA\n+>82_55\n+AATGGAAATGTAGATAATACG\n+>83_55\n+GCTGATTATAAGAACTACGAT\n+>84_54\n+GCAAAGAACAAGCTGAAGGGG\n+>85_54\n+GAAGTAATCGTCAATATGCTT\n+>86_54\n+TCGACTGGATTGTAGATCAGT\n+>87_54\n+TTCGGTTCCGATAGGTACGGA\n+>88_54\n+GCGTAGAAGAACATTTTGATG\n+>89_54\n+CATTGGTTGAACTCATCACGG\n+>90_54\n+CGGTTTAATAAAAGTATGATT\n+>91_54\n+GTGTAGATCTTCAGATAGATA\n+>92_53\n+ACAAAGTTTGGTGGAATTGGG\n+>93_53\n+TAATTTGCTGTAGTTCGTAGA\n+>94_53\n+AAAGTTAATTTTATACGGAGA\n+>95_53\n+ACTACTTTATCTGATCGGAGT\n+>96_52\n+GTTATCTGATCTTCGCGGATA\n+>97_52\n+TTGAGGGATCACTTGTTGAGA\n+>98_52\n+TTGTGATAAAGAATGTTGGAT\n+>99_51\n+GTTGCCACTGATGATACTGGA\n+>100_51\n+CTGGATTGTAGATCAGTTGGT\n+>101_51\n+GAGGGACCGTTTGTATGGACT\n+>102_50\n+GTAGACAAGTTAGAAACTGGC\n+>103_50\n+AGGTGGTAAACTTGTACAGGA\n+>104_50\n+AACAGGACGTAGAACATTCAC\n+>105_50\n+TGAATTTCAAGATCTTTCAGG\n+>106_50\n+TTACACTCAAAGATTGGGA\n+>107_50\n+ATGCAAGTACTTATCGTAGTT\n+>108_49\n+ACACAGACTGGTCATTATGGA\n+>109_49\n+CTTTGAGTGAAATAGTGA\n+>110_49\n+CCGGCCTAAGATCACTGTGGG\n+>111_48\n+AGAATTTCTGCTCTTTTGGTG\n+>112_48\n+TTTTGTAGACTGTCTGATAGT\n+>113_48\n+TATGGGTCTTTATAATCGTAA\n+>114_48\n+TTTTGATGCTGATTATAAGA\n+>115_48\n+TTTGTTTGATTGTTAATCATA\n+>116_48\n+GGATAAACAAATAAAATATGAGAAGA\n+>117_48\n+GGGCGATGTGTAGAACAAATC\n+>118_48\n+ATTTGCTGATCAATTTGAAGA\n+>119_48\n+CTATAATTTTCTAGCAGAAGA\n+>120_48\n+AATCGGAAAGACGAACCTCGT\n+>121_47\n+CGATTGGTTTTGTAGACTGTC\n+>122_47\n+CAACATGAGGTGGAGAATTTTAAGGT\n+>123_47\n+AATAAATTGATCGATATGGAT\n+>124_47\n+CGTCCGCCGCAGATCAGTGGA\n+>125_46\n+GCAGTGATCGATATCGGAT\n+>126_46\n+AGAGATGAATTTGATACAGGA\n+>127_46\n+TCCACTAT'..b'CTTCTGACT\n+>28746_1\n+GTCAGATCGTTTAAGGTTAA\n+>28747_1\n+AAGGATTAGTAGAGTATCGGAAGTGCCG\n+>28748_1\n+CTGGGTGTGGGTTCGTAGTGCTAGC\n+>28749_1\n+TTCTGCTAGAAAATTATAGCG\n+>28750_1\n+ATACCAAGAAGGCTCTTCAAACC\n+>28751_1\n+CGACTGGATTGTAGATCAGTTGGT\n+>28752_1\n+AACTGGTCGCATGCGCGCAA\n+>28753_1\n+CATAATCAGCGAAGTGGTATCT\n+>28754_1\n+TTTCATCAAAAATTTCTGAA\n+>28755_1\n+TGGAGATGTTCCAGTTGAAAGT\n+>28756_1\n+CTACCTATGGTAGCAATGGG\n+>28757_1\n+CTGTTTATCGAGATTCCACTA\n+>28758_1\n+CTCAAAGATTGGGAGGTTGA\n+>28759_1\n+CACAAAAACAACAGGACGTAGA\n+>28760_1\n+TTGTAGACTGTCTGATAGT\n+>28761_1\n+ATTGAGAATATCTGTGCA\n+>28762_1\n+GATATCCGCGAAGATCAGAT\n+>28763_1\n+CAATTCTACGTTCATCGACTT\n+>28764_1\n+TCGAACATGTTAAAGAATTTGA\n+>28765_1\n+GAAATTCAGCTAAACAAAGGC\n+>28766_1\n+TTGCGAGCTCCACGTAAAA\n+>28767_1\n+ATACAGGATACACCGGACAAGA\n+>28768_1\n+AAGTGCCGAAGAATATAACGTG\n+>28769_1\n+CCAAGAAGGCTCTTCAAACC\n+>28770_1\n+GCGCAAGTTGTGGGAAAAAGT\n+>28771_1\n+TTATCTTTATACTCATCGCTA\n+>28772_1\n+TCGTGGTAACAAGAGTGGTAGT\n+>28773_1\n+TTGAACACAACGACAGAATCT\n+>28774_1\n+TTTTGCGGTCACCAGGTCCAA\n+>28775_1\n+TCACGTGAGAAGTAATATGTT\n+>28776_1\n+CTCAACTTCTGGTCCAATTGGC\n+>28777_1\n+ATGCGGATTTTTATTATATAGTGC\n+>28778_1\n+TTTTGATGCTGATTATAAGAACTA\n+>28779_1\n+TCCACATAAAAATTCGGAAACT\n+>28780_1\n+CCTTAAACGATCTGACTCCAG\n+>28781_1\n+CCTGTCGATTTGCCAATT\n+>28782_1\n+AACCGCCGAAAGTAAGGT\n+>28783_1\n+ACAGAATTTTTGGAAAGTAAA\n+>28784_1\n+CGTAGCAACCGTCACACAAA\n+>28785_1\n+TTGAATAATTTGGCTTTGAA\n+>28786_1\n+TTTTATTCTTGTTCCTCCTCA\n+>28787_1\n+ACTAACTTTCGTTAAAAGG\n+>28788_1\n+ATGTACTCGTTTCCACATAA\n+>28789_1\n+GTTGCTTATCAATTGCGA\n+>28790_1\n+TATTTAATACTGATGAGATT\n+>28791_1\n+GTGAAAACTTTCCAATATGC\n+>28792_1\n+TCTGTTAAGAGGTCTCATAAGT\n+>28793_1\n+CAGATAAAGTCCGTGAAACTG\n+>28794_1\n+AAAGTACACATTTTGTTTGG\n+>28795_1\n+ACTGTTGGTCTCCTTTTATA\n+>28796_1\n+ATACATCGGCGAAAAAGTAT\n+>28797_1\n+AAAGGTTGTAACTTTGAGAAATAAGT\n+>28798_1\n+TACGTATGTAGTCGACTATCA\n+>28799_1\n+GGTTTTGTAGACTGTCTGATAG\n+>28800_1\n+TAATTGGTCAGGAACAATGTT\n+>28801_1\n+ACCGCCGAAAGTAAGGTTGAATTGCA\n+>28802_1\n+AATCGTTATTATGGCATTAAAAGA\n+>28803_1\n+AACATGAGGTGGAGAATTTT\n+>28804_1\n+CATGATGTCTTTCCGTGACCTAGTGGC\n+>28805_1\n+AACAAGTTGCCGGACAAAA\n+>28806_1\n+AAACGAAGAACCTGAAAGATCT\n+>28807_1\n+ATTTGTGCCAATGGTCTAGT\n+>28808_1\n+ACTCGTGATTCAGTGTGAGG\n+>28809_1\n+ATCAAAAAGAAGTGTTGAACAGTGT\n+>28810_1\n+TCCTACTGCTGGAGCAGAAAA\n+>28811_1\n+GATGCACTTGGCTTGAACCG\n+>28812_1\n+CAAAAAGAGTTATACATTGA\n+>28813_1\n+GATATTGGTAATGCGTTTAG\n+>28814_1\n+CAACACAACTTTCGCAGATA\n+>28815_1\n+AAGTATCACTCGCTTATAGGAGA\n+>28816_1\n+GAATACTACTTATCATCGT\n+>28817_1\n+TCTTTTTCGGACTACCTGAA\n+>28818_1\n+ATTTTTATTACGGACCAATGTCGAA\n+>28819_1\n+TGTGCCAATGGTCTAGTGAGT\n+>28820_1\n+TAAAAATCGACCCAGTCATA\n+>28821_1\n+CCAATACTTTTTGATCCGGTTG\n+>28822_1\n+TGGAAACTCTTAATAAATC\n+>28823_1\n+TTGTAGATTTGGAGAGTGATA\n+>28824_1\n+GCTAGATCGACCGGCGATAG\n+>28825_1\n+GTTGTAGGAGGACTGGCTGACG\n+>28826_1\n+AAATAGTGAAGATAATTGGAGA\n+>28827_1\n+CTAACGTTCCCGTTTTAAAAGGT\n+>28828_1\n+TACCGCGCTAGAGATTAGA\n+>28829_1\n+TGGAATAGTAGTTAGTGAGG\n+>28830_1\n+TAACAACAATCAAGCTCGAAATGAA\n+>28831_1\n+AAGTTATCTTTGAGCGGT\n+>28832_1\n+GGAACGAAGCACCAAAAGAGCAGA\n+>28833_1\n+ATTCGGAAACTTGGAATGAT\n+>28834_1\n+TTAACTTCAATAAGTAGCACT\n+>28835_1\n+CGGTCTAAATTCACAAGAAA\n+>28836_1\n+CTACTGGAGTCAGATCGTT\n+>28837_1\n+CAAAGGCTGGACTGAAAT\n+>28838_1\n+ATTAAAAGCAATAATTCGATA\n+>28839_1\n+GCAACACAGACTGGTCATTA\n+>28840_1\n+CAAACTACGAAAGATTCCTTAGA\n+>28841_1\n+TTTGATCCCTCTAAGCTCGTTCAG\n+>28842_1\n+ATGGCGAGTTTTGGATTTAA\n+>28843_1\n+TAGGGATGGTGAGTCGATG\n+>28844_1\n+CGAATTCCTCGTGTTACGGT\n+>28845_1\n+CCGTTATCTGTATTACCAATT\n+>28846_1\n+TAACCGGAAGCACGTCAGTG\n+>28847_1\n+TCACTGATCGCTGAATTTTT\n+>28848_1\n+GAATTTAGACCGTAATCAAAAGGCTT\n+>28849_1\n+AGTGTTGTTACCAACACAACTTTCGCA\n+>28850_1\n+CTTTTTGATCCGGTTGTCC\n+>28851_1\n+TTAAGTCAATTCAATCCTCA\n+>28852_1\n+ATCAGTGGGTCGAATCGGACAGA\n+>28853_1\n+GATAATATCATCGAAAGGAGTTTG\n+>28854_1\n+CAGATTGAAACGCTCGTTTGTT\n+>28855_1\n+AGGCATTACGCACAAGAATTA\n+>28856_1\n+AAATATACATCGGCGAAAAAGT\n+>28857_1\n+GTTCTGCTTGTGTTTCGACG\n+>28858_1\n+GGAGCGATTGACGAGAGCTAT\n+>28859_1\n+CTATCTCTGAACAACTGGCA\n+>28860_1\n+GACCACGGAAGAATTTTCGCG\n+>28861_1\n+ACGGGACGTAGAGGTGTGTT\n+>28862_1\n+GTAAACCACATCAAATGATCCTTGTT\n+>28863_1\n+GAGATTAGAGATGTAGGACCGTG\n+>28864_1\n+TTGTATCCCAGTGGATTTA\n+>28865_1\n+ACCTCAATTGGAATTGTTTTGA\n' |
| b |
| diff -r eedbe32980bb -r 070f9de358fc test-data/output.fa --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/output.fa Sun Jun 21 15:05:17 2015 -0400 |
| b |
| b'@@ -0,0 +1,237 @@\n+>Locus_1_Transcript_1/1_Confidence_0.000_Length_342\n+TCTTAAAAATAGAGTTATCCTGAAGTTGCAACAGGCGAAGATGGGAAATAGAATCTTGAG\n+TTTTTCAAGTTCAAAATTAAAGGACCAACCCATCAAAATAGCGCAAGCGAAGAGTGGAAG\n+GACGAGAGTATTCCATTGTATCCCAGTGGATTTAATCTTGTTTTCGGGAGCGCTATACGG\n+CCCGTACAAAGAAGCATACACAAAGGCTGGACTGAAATGCTATCATGCTGTAGGAATAGA\n+TCCGAAATCAGTTGGTTGGCAACAGTTGGCTACGTATATGACGAAGCATCCTAATTATTT\n+TGATGCTGATTATAAGAACTACGATAAGTACTTGCATAGGCA\n+>Locus_2_Transcript_1/1_Confidence_0.000_Length_1211\n+GGTCTATGACCATTCTGCGGTTCCTGTAGCGCCAGTCGTCGAAACACAAGCAGAACAGCC\n+GGAAGTTCCAGTATCATCAGTGGCAACGCGAAAGAACGATACGGGACATCTGGCAACAAA\n+GTGGTATGATTTTGCCAAAATTAGTCTGTCAAACCCAGCTAACATGAATTGGACCACACT\n+AACCATAGACCCGTACAACAATGTTACATTGTCTAGGGATGGTGAGTCGATGGTTCTACC\n+GTGGAGGCGAAATGTTTGGACAACCGGATCAAAAAGTATTGGATACATCCGAACAATGGT\n+TGCACAGATTAACATACCACGTCCGCCGCAGATCAGTGGAGTGCTCGAAGTTAAAGATTC\n+AATCAATAATTCAAGTATTTCACTGGTTGAATTTGGAGGAAAAGTGGAAATCCCAATTAT\n+TCCGAAGGTTATGAACGGACTAGCAACAACTGCTAGTTTGCCAAGGCATAGACTAAACCC\n+GTGGATGAGAACCGCCGAAAGTAAGGTTGAATTGCAATATCGAATTATTGCTTTTAATCG\n+AACTAGCGACATTGCTGACCTCAACGTTAGCGTTTTGTTGCGACCTGGCGATTCGCAATT\n+CCAATTGCCGATGAAACCTGACAATAATGTGGATACACGTCATTTTGAGCTTGTTGAAGC\n+TTTGATGTACCACTACGATAGCCTCCGAATTCGAGGAGAAGAACAGAGTCTGCCAGAAAA\n+TGCACCTAATGCAGTTTCAAACCCTCAGCAGTTCATCACACCCGCAACCGCTCTAAGTGC\n+CGAAGAATATAACGTGCACGAGGCGTTGGGTGAGAGTGAGGAATTGGAGCTGGATGAGTT\n+TCCAGTTCTGGTGTTTAAGGGAAATGTTCCCGTTGACTCAGTGACGTCCATTCCTTTGGA\n+CCTCGCAACCATATACGACTTCGCTTGGGACGGAGAACAGAATGCAATTTCTCAGAAATT\n+TCAGCGTTTTGCTCATTTGATACCGAAAAGCGCAGGTGGTTTTGGCCCAGTGATTGGTAA\n+TTATACTATCACGGCTAACCTCCCCACCGGTGTAGCAGGTCGTATTCTGCACAATTGTCT\n+CCCAGGAGATTGTGTAGATCTAGCAGTATCGAGAATCTTTGGTTTGAAGAGCCTTCTTGG\n+TATTGCAGGAACAGCAGTTTCAGCTATTGGTGGCCCACTCCTTAACGGTTTGGTTAACAC\n+TGCAGCGCCTA\n+>Locus_3_Transcript_1/1_Confidence_0.000_Length_757\n+CGAATTAAGTCGACTTGGTGATTGTGGAAGTCCAATTGTCTTGGCGTCAGGAAAGAAGGC\n+AGGAAAACTGATAGGTTTTCACGGTTATCACTCTCCAAATCTACAAACGTGGTACGGAGC\n+AATGTTGACTGTTGAGGACTTGGGAATCATCAACGGCGTAGAAGAACATTTTGATGACCC\n+ATGGGCCAAACTTATTACACAAGGACTACCTGTCGATTTGCCAATTGGACCAGAAGTTGA\n+GTATGTCGGTAATCTAATAAGACCTAGTTTACCTGTGACAAATGACTCACTAGACCATTG\n+GCACAAATCACCATTTGCTGATCAATTTGAAGAACAATTAGCACCTGGTCGATTGAATCC\n+GTATGATTCATATATTGAAGGAGATTTGCCAACTAATCTTGAGGGCCGAAAAAGTTTAAT\n+CTTAGGCCCGAATAGTGAAATGGCAAAAACTCTTCCAGAATTGGATCAAGGAATTATCGA\n+CTGGATTGTAGATCAGTTGGTGGTGGAACAAGTCGCAACTTTCAAAGCAGAAAACCTTTT\n+AACGAAAGTTAGTGACGATATTGACGAAATGCTTGACTATGCCCTGAATGGAAATGTAGA\n+TAATACGTATGTTAGGGGTATGGAAGTCAACAAAGCATCAGGATTACCTTGGAGTCTTTC\n+AGGTAGTCCGAAAAAGAGTGACTTTATCGATGTAGATGAAGCTACTGGAGTCAGATCGTT\n+TAAGGTTAATGCTAATGGAGACGCTCTTAAAAATAGA\n+>Locus_4_Transcript_1/1_Confidence_0.000_Length_131\n+TCTCAATTTAGAGAGTTAGTAGACAAGTTAGAAACTGGCATTCTATTCCATGAAATAAAA\n+TCGGTCACAAATGGAATTAGATGGTTAGGAGGAGCAGGGAACAATGGACACGTTGGAGAA\n+AGAGTAAGAGT\n+>Locus_5_Transcript_1/1_Confidence_0.000_Length_588\n+GGTGCACCGCAAGCATCTACGCAGGCGACCGATACTATGGACGTGCTGGTGAATAAGCAT\n+TTAGTTAAAGTTCATTGTCTGAGTTATGAAAATTTGAATAATTTGGCTTTGAATGGAACA\n+CAAGTGTTTGCTCTAGCATCCGACAATATATTGATCGTACCTGCACATGCAGCCAGACAG\n+AACAAGTGGATCCGGTTTAGTCGCGCAACACAGACTGGTCATTATGGAATAGCGAAAGTC\n+GATGAACGTAGAATTGATTTTACACGTGACATCGCTATAGCCGTTATTTTGACCAGAGCT\n+GAAGCAGAACAAAAATTGTGCGAACTAGGTCACTCGATCCAGTTAACGAATATTAGTAAA\n+GAGAAATTCCACTTCCCTCTTATTACGAAATATTTGTTAACCGCTGACCAGTCAGAAGTA\n+GAATGGATGAATTGTACGACCCTACATTATTTTGCAAAGAATAGAACCGTGGGGTTAGGA\n+AGAACGACATCATTCCAAGTTTCCGAATTTTTATGTGGAAACGAGTACATATCCAAAAAA\n+CTGGTCGCATGCGCGCAAGGACTCCAGTCAAGTGTCGAATTAAGTCGA\n+>Locus_6_Transcript_1/1_Confidence_0.000_Length_365\n+ATTCAAATATGATTAACAATCAAACAAACAAAAAGGGACCACAACTAGAGAGAGTACATT\n+TTGGTAGTGCGCAAGTTGTGGGAAAAAGTACCAAACGACGACAACGCGGAACCAAACTTG\n+ACATTGAATATACTGTTAAAAGGAACGAAGCACCAAAAGAGCAGAAATTCTTAGTTTCAG\n+AAATTTTTGATGAAAAGTTGGATAAACAAATAAAATATGAGAAGAAGCAAAATCATACTT\n+TTATTAAACCGAAATTAAATTTAGTTACTAGAGAAGAACAACATGTGACTAAGAAGGTTT\n+TAAGAGGTAAAGAACGAGCTGCAACTCATGCTTTTATGAAGGAGATGGTTGAATCTAACA\n+AGATA\n+>Locus_7_Transcript_1/1_Confidence_0.000_Length_137\n+ATATGACATGCCCCTACGCGTTATCGCTGGCCTGTCAACCCTTGCCAAAACAACTGAAGA\n+AGACGACAACACCTCAACTGGAATAGTAGTTA'..b'>Locus_19_Transcript_1/1_Confidence_0.000_Length_570\n+GCAAACCTGATTTTCCGAGGGGCTACCCATAGTTATAAAAACTATTGGTTCAGCCAGAGT\n+AACCCTTTCGGAAACGCAAAAGCTTAAAAAACCTGTTTATCGAGATTCCACTACTCCCCG\n+CGTGGGGAGTCGTTTGCACAGATATTCTCAATAAATGTTAATTTTTCTCCTATAAACTAT\n+AGGTATTAACTTTCAGGAAAAGTTGCAATTGCTAGCACTACGAACCCACACCCAGTGCGG\n+GCTCCAAAACATCATCACACCGTCCTTTATAATCTTCTGCTAGAAAATTATAGCGACCAT\n+CCTCATATTTAATGTGATTTTTTAACCATACGCGCAAACCAATTTTAAAAATTAGTTTCT\n+GAGACGCGCACATGGCGAGTTTTGGATTTAATCTACTGCCTCACGGAAGGGAAAACAGTT\n+TCTGCTACGTTTCGTTCCGTCCTGCGTTTACTTTCACCTAATACGATTTTGCGGGTCGTA\n+GTAGGTAGCAGACCGGTGTCTGTTCGCGAAAATTCTTCCGTGGTCTCCCCACTCGAGTTT\n+GTACTCAAGTAGCGTTTTACTCTCTCTATT\n+>Locus_20_Transcript_1/1_Confidence_0.000_Length_193\n+AACTACTTTAGCTAAACCGTCAAGTTGCAGTTTTTGTTGATCGAGCTGGTTTTTTACTGC\n+TGTTACTGAGGATTGAATTGACTTAATCTCAGTAACCTCGTTCTCGTCTAAAACGGCGAA\n+AAGAGTGGTGTTCTGATCAAAGATCTCCTCTTTTAATGCCATAATAACGATTACAGAATT\n+TTTGGAAAGTAAA\n+>Locus_21_Transcript_1/1_Confidence_0.000_Length_224\n+TTTCCAGCTCGTATTCAACAATACTGCTAATGCTCCATTCAAGGTTCTGTTTGTACCACA\n+TTTTAGCTTTTGACAAAGTTCATTGTAGTAATCTTCACCCCAAAGAGCTGCTTCGATCAA\n+CTGTTCTTGCACAAGATTTACCCACACAGTTATCTGATCTTCGCGGATATCAGTCCATAC\n+AAACGGTCCCTCAATAGATCGTTGTAGCAATGGAGCTAAAACCA\n+>Locus_22_Transcript_1/1_Confidence_0.000_Length_211\n+AGAAAAAGTAAATATTCTTTGGAACCTCATTAGGCTCCAACCTCAACATGAGGTGGAGAA\n+TTTTAAGGTTTACTTAGAAGATTTGCAGGCGTCCCCGCCGAAAACTGGGACAATTTGTGC\n+AAAAGTAGTGAATGATATAAAAGCTGAAGTAGCTTCAAGTTATAGGCAATTTAACAATTA\n+CTACACTCGTTTAACAAAAGATGGTATGCAC\n+>Locus_23_Transcript_1/1_Confidence_0.000_Length_245\n+TGTTAATTGAAGCTTTCATTAATTCTTTGTTGCAAAATCTAGGTATCATGATGTCTTTCC\n+GTGACCTAGTGGCGAGCCCATGGATATTGCTAGTAATAGCTATACCCTTGTGTGCATTTG\n+CCAGTTCAGCGTCTATGGTTAGGGAGATGCTTTTCCGTCATAAAATTACAGAAAATATTT\n+TAAAAGGAACAGGAGTAGAAGAATTGTTTAATCCATTCGGGATAATTATTAAATATTTCC\n+TTTAT\n+>Locus_24_Transcript_1/1_Confidence_0.000_Length_577\n+AAAAATTGAAGTTTACACTTGGCAAAGAACAAGCTGAAGGGGATAGTATCGAACATGTTA\n+AAGAATTTGACGGTGATGTTAAGTTCGAAACAATTGAGAAACTGTTTGATCATATTGATG\n+AACACCCTAACCTTAACATAGTAGGCTTGAATTTGATAGCACCAGAAAACCCAATTGCTA\n+TCTATGCCGCAAGAGAAGAATCGTACGACTTTTCATTCTCCGAACCGCGCCCGCCTCAAT\n+GGAAAAAGGTGGTAACGTTTAAGGAAGACAGTAAACGAATAATCTCTCTACAGTTGCGAG\n+GAGAAGATACTGAAGATAACATCCTCGATGAGATTGAACACGCTATAAAAGTCTCACATG\n+GAATGCCGTATGCTGAATGGATATTCAATGGATGGTTTAAGAAAGAGAGCAACGACAATA\n+TATTATATTGTGTCGAGTTGGACCTGGTGACCGCAAAAACCCAATCAGGCCCAGTTGGAT\n+GGACACGTGCTCAAACGAAGAACCTGAAAGATCTTGAAATTCAGCTAAACAAAGGCAAAC\n+CGATCGATGTTAAATCAGTGGTTTTAGGTGCACCGCA\n+>Locus_25_Transcript_1/1_Confidence_0.000_Length_603\n+TGGTCATAGACCAATTCCTGTACAAGTTTACCACCTTCGGCTGTAACTTCATTGTCAGCT\n+TGTTCTTCGCCCGTAATTGGTTTAGTTGGGGGAACGGGCGGCTTTGGCACTGGAACTGGG\n+ATAAAGTTCATGCCTTTTTCATTATAAGCTGACGTATCTGCATGCTTATAGCCTGTGGCT\n+TTAATGTTCGCCATGCAACACCAAACGGTGATGCTGAGTGGGGTATTGACCGTTTCGTTA\n+CTGTTATCTTCGATGGTTTCAATAACAATACTTCCTCCACTCTGTCCGATTCGACCCACT\n+GATGTTTCTACGGTCGATAGATCGTTGCTCCAAGGAACTGAAAGTGCAATGGTTGGAGAT\n+GCACTTGGCTTGAACCGAATTCCTCGTGTTACGGTTGTAGTATCAAATTCAGGAGTGTAG\n+ATCTTCAGATAGATACCTGTTCCCAAAGGTGCTGGAACATGCACTATATAATAAAAATCC\n+GCATGGAAATAATTATATAGTTCTAGCACCGTTTTTTGTTGGTAAGTGAAAACAGGATCT\n+ACCACAAGTCGGGTTCCTACTGCTGGAGCAGAAAAGCGGCGTGGCAAGAAAGCACTAAAC\n+GCA\n+>Locus_26_Transcript_1/1_Confidence_0.000_Length_182\n+TAGTTATACTACTACAATTGATAATTGCCTGGCGAACGATATTTATGGTTTGTATGCGTG\n+GGTGAAGACAACCGGCCTAAGATCACTGTGGGATTACCGACAGAATGTCTCGAGCGTCGC\n+GTTTGGTGATGATATTATAAAAAGCGTTAGCGATGAGTATAAAGATAAGTATAATTATTG\n+TA\n+>Locus_27_Transcript_1/1_Confidence_0.000_Length_151\n+TATTTACTTTTTCTTCTCCTATAAGCGAGTGATACTTATAGTCCGAGTTTATGACGAGCT\n+GGATCCATTCCCTGTGCAGTTCTTCGTTTATAGGGAATCCATTCTGAGGGTAACTCTTTT\n+TCGGAAATTGGGCTGTATGAGCAATAACTCT\n+>Locus_28_Transcript_1/1_Confidence_0.000_Length_215\n+TAAGAGATTCTGTCGTTGTGTTCAACGTGTCTAAGGAATCTTTCGTAGTTTGATCAAGCT\n+CATTTAATGCTGTGGCAAGGGTGTTAATCTGTTTTGCCTGTTGACTTGTTGTTGTGGTTA\n+ATTTATCAACTTCTGAACTCATTTCTACCAATGTTGTATTGATATTAACGAATTGTTCTT\n+CATTTCGAGCTTGATTGTTGTTAACTACTTTAGCT\n+>Locus_29_Transcript_1/1_Confidence_0.000_Length_113\n+TCAATTTTTGAAGCTTAGTAGTTGCGATGTTCTTCTGTTTGGCTCGTTTTTCACCTTTAC\n+TCTGCTCTTCCCCAGCTATAGCATATTGGAAAGTTTTCACTATTGTAATAATA\n' 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