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Commit message:
planemo upload commit 4ba1ebe7b3f5e3fabf78b5fed7ed0b92e2cbf9e5-dirty |
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modified:
add_expression_data.xml |
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| diff -r dbeabf9bf091 -r 0b279190f90d add_expression_data.xml --- a/add_expression_data.xml Thu Mar 07 09:08:33 2019 -0500 +++ b/add_expression_data.xml Fri Jun 28 05:01:37 2019 -0400 |
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| @@ -1,4 +1,4 @@ -<tool id="rna_abbased_data" name="Add expression data" version="2019.03.07"> +<tool id="rna_abbased_data" name="Add expression data" version="2019.06.27"> <description> (RNAseq or Immuno-assays)[Human Protein Atlas] </description> <requirements> @@ -96,6 +96,10 @@ Input can be either a list of Ensembl gene (ENSG) IDs (copy/paste mode) or a file containing multiple fields with at least one column of Ensembl gene IDs. If your input file contains other type of IDs, please use the ID_Converter tool to create a column of Ensembl gene IDs. +.. class:: warningmark + +In copy/paste mode, the number of IDs considered in input is limited to 5000. + ----- **Parameters** @@ -132,7 +136,7 @@ **Data sources (release date)** -HPA source file (Human Protein Atlas version 18.1): http://www.proteinatlas.org/download/proteinatlas.tab.gz +HPA source file (data are based on the Human Protein Atlas version 18.1 and Ensembl version 88.38): http://www.proteinatlas.org/download/proteinatlas.tab.gz ----- @@ -140,13 +144,13 @@ **Authors** -Lisa Peru, David Christiany, T.P. Lien Nguyen, Florence Combes, Yves Vandenbrouck - CEA, INSERM, CNRS, Grenoble-Alpes University, BIG Institute, FR +Lisa Perus, David Christiany, T.P. Lien Nguyen, Florence Combes, Yves Vandenbrouck - CEA, INSERM, CNRS, Grenoble-Alpes University, BIG Institute, FR Sandra Dérozier, Olivier Rué, Christophe Caron, Valentin Loux - INRA, Paris-Saclay University, MAIAGE Unit, Migale Bioinformatics platform, FR This work has been partially funded through the French National Agency for Research (ANR) IFB project. -Contact support@proteore.org for any questions or concerns about the Galaxy implementation of this tool. +Help: contact@proteore.org for any questions or concerns about this tool. ]]></help> |