Repository 'saint_interactions'
hg clone https://toolshed.g2.bx.psu.edu/repos/bornea/saint_interactions

Changeset 16:0e6753703741 (2016-01-29)
Previous changeset 15:d5b1e73e6f21 (2016-01-29) Next changeset 17:41286262976c (2016-01-29)
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Uploaded
added:
ConsensusPathDB_mouse_PPI.txt
b
diff -r d5b1e73e6f21 -r 0e6753703741 ConsensusPathDB_mouse_PPI.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/ConsensusPathDB_mouse_PPI.txt Fri Jan 29 12:52:59 2016 -0500
b
b'@@ -0,0 +1,17762 @@\n+#  ConsensusPathDB (version MM) list of mouse protein interactions\n+#  source_databases\tinteraction_publications\tinteraction_participants\tinteraction_confidence\n+BIND\t14988405\t5HT2C_MOUSE,DLG3_MOUSE\t0.0149385\n+BIND\t11809816\tIPO5_MOUSE,RAN_MOUSE\t0.0171217\n+BIND\t11805142\tSH2B3_MOUSE,KIT_MOUSE\t0.23599400000000001\n+BIND\t11805154\tQ62056_MOUSE,CD9_MOUSE\t0.012235599999999999\n+BIND\t11809816\tUB2E3_MOUSE,IPO11_MOUSE\t0.0141491\n+BIND\t15543153\tPP2BA_MOUSE,CALM_MOUSE\t0.26212299999999999\n+BIND\t9488663\tQ3TMF4_MOUSE,ARAF_MOUSE\t0.41989799999999999\n+BIND\t15603741\tZDHC3_MOUSE,SNP25_MOUSE\t0.016401700000000002\n+BIND\t15603741\tZDH17_MOUSE,LCK_MOUSE\t0.047627200000000001\n+BIND\t15603741\tZDH17_MOUSE,SNP25_MOUSE\t0.023113600000000002\n+BIND\t15603741\tALEX_MOUSE.GNAS1_MOUSE.GNAS2_MOUSE.GNAS3_MOUSE,ZDHC3_MOUSE\tNA\n+BIND\t15603741\tZDHC7_MOUSE,SNP25_MOUSE\t0.0075284899999999997\n+BIND\t15603741\tALEX_MOUSE.GNAS1_MOUSE.GNAS2_MOUSE.GNAS3_MOUSE,ZDHC7_MOUSE\tNA\n+BIND\t15577914\tMDM2_MOUSE,DHC24_MOUSE\t0.53275700000000004\n+BIND\t15688017\tMTSS1_MOUSE,SRC8_MOUSE\t0.0299776\n+BIND\t15688017\tACTS_MOUSE,WASL_MOUSE\t0.058625700000000003\n+BIND\t12391150\tE9PYJ8_MOUSE,NOTC1_MOUSE\t0.56142400000000003\n+BIND\t10022874\tMKNK1_MOUSE,IF4G1_MOUSE\t0.27010000000000001\n+BIND\t15659653\tISL1_MOUSE,STAT3_MOUSE\t0.029418300000000001\n+BIND\t12614612\tORC5_MOUSE\t0.0089412599999999995\n+BIND\t12614612\tQ3TQX1_MOUSE,ORC5_MOUSE\t0.96860999999999997\n+BIND,Biogrid,PDB,IntAct\t12192004,15286659,14973489\tCDT1_MOUSE,GEMI_MOUSE\t0.75986900000000002\n+BIND\t15965469\tNBN_MOUSE,Q5SV02_MOUSE\t0.92760600000000004\n+BIND\t7737275,9417079\tCD28_MOUSE,GRB2_MOUSE\t0.51602400000000004\n+Manual upload,BIND\t16099987,12016225,9275233\tPP1G_MOUSE,NEB2_MOUSE\t0.080689899999999995\n+BIND\t14560013\tRXRA_MOUSE\t0.0089412599999999995\n+BIND\t16025117\tJAK2_MOUSE,ACHA7_MOUSE\t0.54061999999999999\n+BIND\t12646615\tAP2A2_MOUSE,CD22_MOUSE\t0.27407399999999998\n+BIND\t14559231\tSMAD2_MOUSE,CO5A2_MOUSE\t0.0062170799999999998\n+BIND\t15377783\tAP2B1_MOUSE,Q8CBB7_MOUSE\t0.86776799999999998\n+BIND\t\tDCTP1_MOUSE\t0.0060519700000000003\n+BIND\t14585983\tUBR2_MOUSE,UBE2B_MOUSE\t0.104864\n+BIND\t14580336\tG5E884_MOUSE,NCK1_MOUSE\t0.493087\n+BIND\t14573547\tTNR12_MOUSE,RAC1_MOUSE\t0.0274557\n+BIND\t14580336\tG5E884_MOUSE,ARHG7_MOUSE\t0.60970299999999999\n+BIND\t15668168\tRHOA_MOUSE,DIAP3_MOUSE\t0.27261600000000002\n+BIND\t15178455\tDBLOH_MOUSE,BEX3_MOUSE\t0.031977499999999999\n+BIND\t8076637\tGNAI2_MOUSE,Q6PDF2_MOUSE\t0.31354100000000001\n+BIND\t7985028\tHG2A_MOUSE,HB2A_MOUSE\t0.85430899999999999\n+PDB\t\tIFNB_MOUSE,INAR1_MOUSE\t0.10800899999999999\n+PDB\t11911820\tHA1B_MOUSE,GTPB1_MOUSE,B2MG_MOUSE\tNA\n+PDB\t11673524\tKV5AF_MOUSE,HVM03_MOUSE\t0.00436164\n+PDB\t15863617\tCSKP_MOUSE,LIN7B_MOUSE\t0.065227499999999994\n+PDB\t23454976\tSOCS3_MOUSE,IL6RB_MOUSE,JAK2_MOUSE\tNA\n+PDB\t9880525\tA2NHM3_MOUSE,GCAA_MOUSE\t0.0043616999999999996\n+PDB\t22859295\tREV1_MOUSE,DPOLZ_MOUSE,MD2L2_MOUSE,POLK_MOUSE\tNA\n+PDB\t22842901\tKDM6B_MOUSE,H31_MOUSE.H32_MOUSE\tNA\n+PDB\t15528208\tRXRA_MOUSE,MED1_MOUSE,RARB_MOUSE\tNA\n+PDB\t16472745\tQ3US76_MOUSE,DIAP1_MOUSE\t0.00447395\n+PDB\t17151196\tCALM_MOUSE,MYO5A_MOUSE\t0.198189\n+PDB\t18941216\tTVA1_MOUSE,A2NTY6_MOUSE\t0.0044371499999999999\n+PDB\t16761314\tRBM5_MOUSE,HA1B_MOUSE,B2MG_MOUSE\tNA\n+PDB\t22341445\tPSA1_MOUSE,PSB1_MOUSE\t0.93594699999999997\n+PDB\t20047332\tPARD3_MOUSE,CADH5_MOUSE\t0.58339700000000005\n+PDB\t15019787\tQ9D9B8_MOUSE,LV1B_MOUSE\t0.0043616999999999996\n+PDB\t23910026\tIMA1_MOUSE,DDX21_MOUSE\t0.0095222499999999995\n+PDB\t11017099\tQ5R1F1_MOUSE,HA1B_MOUSE\t0.0044355599999999999\n+PDB\t11751972\tHM13_MOUSE,B2MG_MOUSE,HA11_MOUSE\tNA\n+PDB\t22341445\tPSB5_MOUSE,PSA7_MOUSE\t0.95057100000000005\n+PDB\t17606903\tPAR4_MOUSE,THRB_MOUSE\t0.23094400000000001\n+PDB\t22341445\tPSA4_MOUSE,PSB1_MOUSE,PSB4_MOUSE,PSB3_MOUSE,PSB6_MOUSE,PSA5_MOUSE,PSB5_MOUSE,PSB7_MOUSE,PSB2_MOUSE,PSA1_MOUSE,PSA3_MOUSE,PSA7_MOUSE,PSA6_MOUSE,PSA2_MOUSE\tNA\n+PDB\t19923215\tRNH2C_MOUSE,RNH2A_MOUSE\t0.95529699999999995\n+PDB\t22341445\tPSB2_MOUSE,PSB5_MOUSE\t0.93896100000000005\n+PDB\t22341445\tPSA3_MOUSE,PSB6_MOUSE\t0.96030700000000002\n+PDB\t\tLNX1_MOUSE,IGSF5_MOUSE\t0.23273099999999999\n+PD'..b'RS1_MOUSE\t0.78270899999999999\n+BIND\t16244667\tPIPNA_MOUSE,DCC_MOUSE\t0.18544099999999999\n+BIND\t15735665\tTOPRS_MOUSE,PHC2_MOUSE\t0.035147400000000002\n+BIND\t9121432\tE9PYG6_MOUSE,E9PYT0_MOUSE\t0.43996299999999999\n+BIND\t16007079\tCCNB1_MOUSE,CDK2_MOUSE\t0.81876199999999999\n+BIND\t16007079\tCKS1_MOUSE,CDN1B_MOUSE\t0.42178100000000002\n+BIND\t16007079\tCCNB1_MOUSE,CDN1B_MOUSE\t0.53556800000000004\n+BIND\t16244667\tE9QK04_MOUSE,PIPNA_MOUSE\t0.082796599999999998\n+BIND\t15761153\tTGFR2_MOUSE,OCLN_MOUSE\t0.40779799999999999\n+BIND\t12614612\tQ3TQX1_MOUSE,CDC7_MOUSE\t0.153755\n+BIND\t16054028\tLR16A_MOUSE,CAPZB_MOUSE\t0.46115699999999998\n+BIND\t12578829\tRB27B_MOUSE,RPH3L_MOUSE\t0.094930100000000003\n+BIND\t12614612\tQ3TQX1_MOUSE,Q52KC3_MOUSE\t0.66836099999999998\n+BIND\t12578829\tRPH3L_MOUSE,RB27A_MOUSE\t0.076720200000000002\n+BIND\t12614612\tQ52KC3_MOUSE,ORC2_MOUSE\t0.92849999999999999\n+BIND\t12732652\tSTF1_MOUSE,SOX8_MOUSE\t0.0459747\n+BIND,Manual upload\t11287000,16098829,16099987\tMYPT1_MOUSE,ROCK2_MOUSE\t0.73935099999999998\n+BIND\t11278353\tF8VQ72_MOUSE,STAT3_MOUSE\t0.35674699999999998\n+BIND\t8524290\tP85A_MOUSE,UFO_MOUSE\t0.025629699999999998\n+BIND\t15590698\tMYO7A_MOUSE,WHRN_MOUSE\t0.14010300000000001\n+BIND\t15761148\tTGFR1_MOUSE,PAR6A_MOUSE\t0.64997099999999997\n+BIND\t12743034\tLAMA5_MOUSE,F8VQJ3_MOUSE\t0.95318800000000004\n+BIND\t12746448\tLDLR_MOUSE,ARH_MOUSE\t0.80207899999999999\n+BIND\t12743034\tE9QN70_MOUSE,LAMA5_MOUSE\t0.97410699999999995\n+BIND\t12748172\tALK_MOUSE,NIPA_MOUSE\t0.0107457\n+BIND\t12614612\tORC2_MOUSE\t0.0089412599999999995\n+BIND\t15768032\tLEF1_MOUSE,TLE1_MOUSE\t0.57630700000000001\n+BIND\t15188402\tBMPR2_MOUSE,TRPC1_MOUSE\t0.038825800000000001\n+BIND\t15797027\tPI3R6_MOUSE,PK3CG_MOUSE\t0.180507\n+BIND\t9371520\tMPIP3_MOUSE,PLK1_MOUSE\t0.45025500000000002\n+BIND\t12588994\tHS71B_MOUSE,CCND1_MOUSE\t0.46089799999999997\n+BIND\t11929610\tRAB6B_MOUSE,GDIA_MOUSE\t0.0062764800000000001\n+BIND\t9020046\tMMP13_MOUSE\t0.0089412599999999995\n+BIND\t12970760\tCDN1A_MOUSE,CASP3_MOUSE\t0.66344999999999998\n+BIND\t15668168\tDIAP3_MOUSE,RHOF_MOUSE\t0.0156069\n+BIND\t15664176\tCBPE_MOUSE,K1KB4_MOUSE\t0.0148034\n+BIND\t15664176\tCBPE_MOUSE,BDNF_MOUSE\t0.033677400000000003\n+BIND\t15363411\tSNP23_MOUSE,VAMP2_MOUSE\t0.95258799999999999\n+BIND\t9864373\tSGCD_MOUSE\t0.0089412599999999995\n+BIND\t9808458\tHOME1_MOUSE,HOME3_MOUSE\t0.433475\n+BIND\t7744830\tKSYK_MOUSE,PLCG1_MOUSE\t0.45886700000000002\n+BIND\t7651726\tCDK6_MOUSE,CD2A1_MOUSE.CD2A2_MOUSE\tNA\n+BIND\t12520008\tHXB1_MOUSE,MEIS1_MOUSE\t0.038154500000000001\n+BIND\t12520008\tPDX1_MOUSE,MEIS2_MOUSE\t0.040948699999999998\n+BIND\t12578829\tRIMS2_MOUSE,RAB3B_MOUSE\t0.018651600000000001\n+BIND\t12578829\tRAB3B_MOUSE,RIMS1_MOUSE\t0.030089000000000001\n+BIND\t11786915\tQ91XH6_MOUSE,VAMP8_MOUSE\t0.23098399999999999\n+BIND\t10347202\tQ9Z117_MOUSE,SOS1_MOUSE\t0.0050188200000000002\n+BIND\t15542431\tQ8CC06_MOUSE,A2A864_MOUSE\t0.84724699999999997\n+BIND\t10373486\tCAV1_MOUSE,CAV2_MOUSE\t0.85568200000000005\n+BIND\t15188402\tC4BPA_MOUSE,BMPR2_MOUSE\t0.0080841699999999999\n+BIND\t12370310\tSMAD5_MOUSE,Q8BGV5_MOUSE\t0.026915700000000001\n+BIND\t8861907\tEVL_MOUSE\t0.0089412599999999995\n+BIND\t12456676\tSH3G2_MOUSE,SYN1_MOUSE\t0.0139247\n+BIND\t11181534\tTRH_MOUSE,Q9ERT2_MOUSE\t0.023653899999999999\n+BIND\t15992539\tH4_MOUSE,METL8_MOUSE\t0.0043724599999999999\n+BIND\t11137996\tASIP_MOUSE,ATRN_MOUSE\t0.0253093\n+BIND\t11171044\tSHPS1_MOUSE,SIG12_MOUSE\t0.53852999999999995\n+BIND\t11172003\tRUFY1_MOUSE,RAB4A_MOUSE\t0.56534799999999996\n+BIND\t11171101\tSYT13_MOUSE,NRX1A_MOUSE\t0.19788\n+BIND\t15654338\tACTHR_MOUSE,MRAP_MOUSE\t0.032524999999999998\n+BIND\t15385169\tTRPC5_MOUSE,ENKUR_MOUSE\t0.0055952299999999996\n+BIND\t12239342\tQ3UM33_MOUSE,PIAS2_MOUSE\t0.054158400000000002\n+BIND\t10562326\tCLNK_MOUSE,PECA1_MOUSE\t0.17371800000000001\n+BIND\t10570481\tGBG13_MOUSE,GBB1_MOUSE\t0.44369900000000001\n+BIND\t10531037\tSKP1_MOUSE,FXL12_MOUSE\t0.011067199999999999\n+BIND\t10545954\tMSH3_MOUSE,MSH6_MOUSE\t0.97951100000000002\n+BIND\t15226296\tSTAU1_MOUSE,PP1A_MOUSE\t0.031726600000000001\n+BIND\t11842093\tACTN2_MOUSE,MYOZ3_MOUSE\t0.048117399999999998\n+BIND\t8402898\tA2A5V3_MOUSE,FYN_MOUSE\t0.184119\n+BIND\t8402898\tFGR_MOUSE,A2A5V3_MOUSE\t0.0109855\n'