Repository 'prohits_dotplot_generator'
hg clone https://toolshed.g2.bx.psu.edu/repos/bornea/prohits_dotplot_generator

Changeset 1:0ec43f423131 (2016-03-15)
Previous changeset 0:073027792d24 (2016-03-15) Next changeset 2:cfe2edb1c5d8 (2016-03-15)
Commit message:
Uploaded
added:
test_files/SC_SAINT_list.txt
removed:
test_files/MQ_crapome.txt
test_files/MQ_prey.txt
test_files/SAINT_list_MQ.txt
b
diff -r 073027792d24 -r 0ec43f423131 test_files/MQ_crapome.txt
--- a/test_files/MQ_crapome.txt Tue Mar 15 15:24:30 2016 -0400
+++ /dev/null Thu Jan 01 00:00:00 1970 +0000
b
b'@@ -1,575 +0,0 @@\n-User Input\tMapped Gene Symbol\tNum of Expt. (found/total)\tAve SC\tMax SC\n-Q8WVM8\tSCFD1\t17 / 411\t1.5\t4\n-Q13049\tTRIM32\t1 / 411\t1\t1\n-P35232\tPHB\t85 / 411\t3.9\t34\n-O00459\tPIK3R2\t6 / 411\t2.2\t7\n-P09382\tLGALS1\t40 / 411\t4.8\t27\n-P07900\tHSP90AA1\t272 / 411\t30\t327\n-P04259\tKRT6B\t319 / 411\t22.1\t320\n-P04264\tKRT1\t386 / 411\t79.5\t1178\n-Q96P48\tARAP1\t1 / 411\t1\t1\n-Q12774\tARHGEF5\t1 / 411\t1\t1\n-P18433\tInvalid identifier / gene not available\t\t\t\n-Q07021\tC1QBP\t223 / 411\t11.4\t381\n-Q07021\tC1QBP\t223 / 411\t11.4\t381\n-P42338\tInvalid identifier / gene not available\t\t\t\n-Q96NH3\tInvalid identifier / gene not available\t\t\t\n-Q12774\tARHGEF5\t1 / 411\t1\t1\n-P33992\tMCM5\t100 / 411\t5\t34\n-P11021\tHSPA5\t360 / 411\t16.9\t112\n-CON__P13645\tInvalid identifier / gene not available\t\t\t\n-O00459\tPIK3R2\t6 / 411\t2.2\t7\n-O95831\tAIFM1\t101 / 411\t7.8\t92\n-O00567\tNOP56\t96 / 411\t5.9\t50\n-P57088\tTMEM33\t34 / 411\t1.9\t6\n-O95782\tAP2A1\t24 / 411\t2.4\t14\n-O15482\tInvalid identifier / gene not available\t\t\t\n-P05109\tS100A8\t57 / 411\t3.1\t17\n-P42338\tInvalid identifier / gene not available\t\t\t\n-O95782\tAP2A1\t24 / 411\t2.4\t14\n-O60716\tCTNND1\t32 / 411\t4.6\t26\n-P07437\tTUBB\t382 / 411\t37.5\t338\n-Q07021\tC1QBP\t223 / 411\t11.4\t381\n-Q12774\tARHGEF5\t1 / 411\t1\t1\n-P42704\tLRPPRC\t130 / 411\t15.5\t112\n-P07900\tHSP90AA1\t272 / 411\t30\t327\n-O00459\tPIK3R2\t6 / 411\t2.2\t7\n-O95831\tAIFM1\t101 / 411\t7.8\t92\n-P38646\tHSPA9\t307 / 411\t19\t160\n-P04264\tKRT1\t386 / 411\t79.5\t1178\n-P35908\tKRT2\t356 / 411\t44.6\t629\n-P11142\tHSPA8\t396 / 411\t39.2\t332\n-Q8TEM1\tNUP210\t25 / 411\t5.9\t24\n-P62993\tGRB2\t7 / 411\t1.4\t3\n-P00533\tEGFR\t16 / 411\t4.3\t15\n-Q12774\tARHGEF5\t1 / 411\t1\t1\n-Q15751\tHERC1\t1 / 411\t1\t1\n-CON__ENSEMBL:ENSBTAP00000016242\tInvalid identifier / gene not available\t\t\t\n-A5A3E0\tPOTEF\t351 / 411\t11.2\t193\n-P68366\tTUBA4A\t377 / 411\t28.6\t242\n-CON__ENSEMBL:ENSBTAP00000016242\tInvalid identifier / gene not available\t\t\t\n-Q99615\tDNAJC7\t59 / 411\t2.9\t10\n-P82930\tMRPS34\t24 / 411\t1.9\t6\n-P35568\tInvalid identifier / gene not available\t\t\t\n-REV__Q8WX94\tInvalid identifier / gene not available\t\t\t\n-P31948\tSTIP1\t120 / 411\t8.6\t58\n-P00533\tEGFR\t16 / 411\t4.3\t15\n-CON__P13645\tInvalid identifier / gene not available\t\t\t\n-CON__P02533\tInvalid identifier / gene not available\t\t\t\n-P11142\tHSPA8\t396 / 411\t39.2\t332\n-P0DMV8\tInvalid identifier / gene not available\t\t\t\n-P42338\tInvalid identifier / gene not available\t\t\t\n-P12236\tSLC25A6\t201 / 411\t7\t119\n-P05141\tSLC25A5\t223 / 411\t7.1\t58\n-O95782\tAP2A1\t24 / 411\t2.4\t14\n-P42336\tPIK3CA\t1 / 411\t1\t1\n-O00459\tPIK3R2\t6 / 411\t2.2\t7\n-Q8WUY1\tTHEM6\t4 / 411\t1.8\t3\n-REV__Q6IE37\tInvalid identifier / gene not available\t\t\t\n-Q9UBL6\tCPNE7\t19 / 411\t1.6\t5\n-P42336\tPIK3CA\t1 / 411\t1\t1\n-P49411\tTUFM\t139 / 411\t8.6\t53\n-P08581\tInvalid identifier / gene not available\t\t\t\n-P11021\tHSPA5\t360 / 411\t16.9\t112\n-P42336\tPIK3CA\t1 / 411\t1\t1\n-O00459\tPIK3R2\t6 / 411\t2.2\t7\n-P43246\tMSH2\t45 / 411\t3\t27\n-P82930\tMRPS34\t24 / 411\t1.9\t6\n-Q8NEG7\tDENND6B\t2 / 411\t1\t1\n-P62258\tYWHAE\t186 / 411\t9.4\t90\n-O00459\tPIK3R2\t6 / 411\t2.2\t7\n-CON__ENSEMBL:ENSBTAP00000016242\tInvalid identifier / gene not available\t\t\t\n-O00459\tPIK3R2\t6 / 411\t2.2\t7\n-Q92552\tMRPS27\t31 / 411\t2.6\t9\n-P42338\tInvalid identifier / gene not available\t\t\t\n-Q14451\tGRB7\t1 / 411\t1\t1\n-O00459\tPIK3R2\t6 / 411\t2.2\t7\n-Q02978\tSLC25A11\t55 / 411\t3.1\t18\n-REV__Q0VFZ6\tInvalid identifier / gene not available\t\t\t\n-Q07889\tSOS1\t1 / 411\t1\t1\n-P22681\tCBL\t2 / 411\t1.5\t2\n-Q05639\tEEF1A2\t343 / 411\t13.4\t175\n-P00533\tEGFR\t16 / 411\t4.3\t15\n-CON__ENSEMBL:ENSBTAP00000016242\tInvalid identifier / gene not available\t\t\t\n-P52735\tVAV2\t1 / 411\t1\t1\n-P00533\tEGFR\t16 / 411\t4.3\t15\n-P00533\tEGFR\t16 / 411\t4.3\t15\n-Q4G1C9\tInvalid identifier / gene not available\t\t\t\n-P21860\tInvalid identifier / gene not available\t\t\t\n-P11021\tHSPA5\t360 / 411\t16.9\t112\n-P00533\tEGFR\t16 / 411\t4.3\t15\n-Q8NFI3\tENGASE\t2 / 411\t1\t1\n-Q14571\tITPR2\t5 / 411\t4.4\t10\n-P42224\tSTAT1\t23 / 411\t4.7\t19\n-CON__P13645\tInvalid identifier / gene not available\t\t\t\n-P00533\tEGFR\t16 / 411\t4.3\t15\n-P05141\tSLC25A5\t223 / 411\t7.1\t58\n-Q75V66\tInvalid identifier / gene not available\t\t\t\n-O00459\tPIK3R2\t6 / 411\t2.2\t7\n-P00533\tEGFR\t16 / 411\t4.3\t15\n-P62993\tGRB2\t7 / 411\t1.4\t3\n-P0CG4'..b'\n-CON__Q5D862\tInvalid identifier / gene not available\t\t\t\n-P35908\tKRT2\t356 / 411\t44.6\t629\n-O00459\tPIK3R2\t6 / 411\t2.2\t7\n-P46109\tCRKL\t33 / 411\t7.7\t25\n-O00459\tPIK3R2\t6 / 411\t2.2\t7\n-P49368\tCCT3\t165 / 411\t15.1\t114\n-Q14451\tGRB7\t1 / 411\t1\t1\n-P00533\tEGFR\t16 / 411\t4.3\t15\n-O00459\tPIK3R2\t6 / 411\t2.2\t7\n-P11021\tHSPA5\t360 / 411\t16.9\t112\n-Q53GQ0\tHSD17B12\t27 / 411\t1.9\t7\n-P25705\tATP5A1\t210 / 411\t11\t83\n-Q15084\tPDIA6\t129 / 411\t6.7\t52\n-P35568\tInvalid identifier / gene not available\t\t\t\n-O00459\tPIK3R2\t6 / 411\t2.2\t7\n-O00329\tPIK3CD\t1 / 411\t1\t1\n-P42338\tInvalid identifier / gene not available\t\t\t\n-P18433\tInvalid identifier / gene not available\t\t\t\n-O95782\tAP2A1\t24 / 411\t2.4\t14\n-P04264\tKRT1\t386 / 411\t79.5\t1178\n-P04264\tKRT1\t386 / 411\t79.5\t1178\n-CON__ENSEMBL:ENSBTAP00000016242\tInvalid identifier / gene not available\t\t\t\n-P00533\tEGFR\t16 / 411\t4.3\t15\n-Q71U36\tTUBA1A\t389 / 411\t34.9\t299\n-P0CG48\tUBC\t233 / 411\t6.5\t90\n-O00459\tPIK3R2\t6 / 411\t2.2\t7\n-P11021\tHSPA5\t360 / 411\t16.9\t112\n-Q8NF37\tLPCAT1\t7 / 411\t1.4\t4\n-CON__P35527\tInvalid identifier / gene not available\t\t\t\n-P04264\tKRT1\t386 / 411\t79.5\t1178\n-REV__E9PKD4\tInvalid identifier / gene not available\t\t\t\n-CON__P35527\tInvalid identifier / gene not available\t\t\t\n-P04264\tKRT1\t386 / 411\t79.5\t1178\n-P04264\tKRT1\t386 / 411\t79.5\t1178\n-P00533\tEGFR\t16 / 411\t4.3\t15\n-P40763\tSTAT3\t36 / 411\t6\t25\n-Q12774\tARHGEF5\t1 / 411\t1\t1\n-P11142\tHSPA8\t396 / 411\t39.2\t332\n-P11142\tHSPA8\t396 / 411\t39.2\t332\n-Q06124\tPTPN11\t41 / 411\t3.5\t36\n-Q13946\tInvalid identifier / gene not available\t\t\t\n-Q92569\tPIK3R3\t4 / 411\t1.3\t2\n-P11021\tHSPA5\t360 / 411\t16.9\t112\n-P25205\tMCM3\t120 / 411\t6.6\t63\n-Q9Y4H2\tIRS2\t4 / 411\t1.3\t2\n-P62266\tRPS23\t160 / 411\t4.7\t28\n-P00533\tEGFR\t16 / 411\t4.3\t15\n-CON__P00761\tInvalid identifier / gene not available\t\t\t\n-P21860\tInvalid identifier / gene not available\t\t\t\n-P00533\tEGFR\t16 / 411\t4.3\t15\n-CON__P00761\tInvalid identifier / gene not available\t\t\t\n-P35908\tKRT2\t356 / 411\t44.6\t629\n-REV__Q6ZU80\tInvalid identifier / gene not available\t\t\t\n-Q07021\tC1QBP\t223 / 411\t11.4\t381\n-P17066\tHSPA6\t380 / 411\t14.1\t159\n-Q92859\tInvalid identifier / gene not available\t\t\t\n-P42338\tInvalid identifier / gene not available\t\t\t\n-P42338\tInvalid identifier / gene not available\t\t\t\n-P62805\tHIST4H4\t225 / 411\t13.6\t316\n-P13639\tEEF2\t207 / 411\t14.5\t219\n-CON__ENSEMBL:ENSBTAP00000016242\tInvalid identifier / gene not available\t\t\t\n-P43304\tGPD2\t3 / 411\t2\t4\n-P07900\tHSP90AA1\t272 / 411\t30\t327\n-P18433\tInvalid identifier / gene not available\t\t\t\n-REV__Q8WXI4\tInvalid identifier / gene not available\t\t\t\n-CON__P02533\tInvalid identifier / gene not available\t\t\t\n-CON__P13645\tInvalid identifier / gene not available\t\t\t\n-P35030\tPRSS3\t61 / 411\t3.6\t38\n-P00533\tEGFR\t16 / 411\t4.3\t15\n-P21860\tInvalid identifier / gene not available\t\t\t\n-P62993\tGRB2\t7 / 411\t1.4\t3\n-P18433\tInvalid identifier / gene not available\t\t\t\n-P25705\tATP5A1\t210 / 411\t11\t83\n-P11021\tHSPA5\t360 / 411\t16.9\t112\n-P29353\tSHC1\t9 / 411\t1.6\t3\n-P42338\tInvalid identifier / gene not available\t\t\t\n-Q92569\tPIK3R3\t4 / 411\t1.3\t2\n-Q8NF91\tSYNE1\t10 / 411\t1.2\t2\n-Q3BBV2\tInvalid identifier / gene not available\t\t\t\n-P38646\tHSPA9\t307 / 411\t19\t160\n-P14923\tJUP\t109 / 411\t7.7\t46\n-P11021\tHSPA5\t360 / 411\t16.9\t112\n-P11802\tCDK4\t27 / 411\t2.4\t28\n-CON__P13645\tInvalid identifier / gene not available\t\t\t\n-P68871\tHBB\t56 / 411\t2.1\t9\n-Q12774\tARHGEF5\t1 / 411\t1\t1\n-P04264\tKRT1\t386 / 411\t79.5\t1178\n-Q06124\tPTPN11\t41 / 411\t3.5\t36\n-P00533\tEGFR\t16 / 411\t4.3\t15\n-P04259\tKRT6B\t319 / 411\t22.1\t320\n-P04264\tKRT1\t386 / 411\t79.5\t1178\n-P35908\tKRT2\t356 / 411\t44.6\t629\n-P42338\tInvalid identifier / gene not available\t\t\t\n-P42336\tPIK3CA\t1 / 411\t1\t1\n-P62993\tGRB2\t7 / 411\t1.4\t3\n-P05141\tSLC25A5\t223 / 411\t7.1\t58\n-P15924\tDSP\t126 / 411\t19.4\t237\n-P52735\tVAV2\t1 / 411\t1\t1\n-CON__P02662\tInvalid identifier / gene not available\t\t\t\n-Q9Y4H2\tIRS2\t4 / 411\t1.3\t2\n-P07437\tTUBB\t382 / 411\t37.5\t338\n-Q13509\tInvalid identifier / gene not available\t\t\t\n-P00533\tEGFR\t16 / 411\t4.3\t15\n-P63173\tRPL38\t139 / 411\t9\t58\n-Q12774\tARHGEF5\t1 / 411\t1\t1\n-O00459\tPIK3R2\t6 / 411\t2.2\t7\n-P00533\tEGFR\t16 / 411\t4.3\t15\n-P18433\tInvalid identifier / gene not available\t\t\t\n'
b
diff -r 073027792d24 -r 0ec43f423131 test_files/MQ_prey.txt
--- a/test_files/MQ_prey.txt Tue Mar 15 15:24:30 2016 -0400
+++ /dev/null Thu Jan 01 00:00:00 1970 +0000
b
@@ -1,292 +0,0 @@
-Q8WVM8 642 SCFD1
-Q13049 653 TRIM32
-P35232 272 PHB
-O00459 728 PIK3R2
-P09382 135 LGALS1
-P07900 732 HSP90AA1
-Q14568 343 HSP90AA2
-P08238 724 HSP90AB1
-Q58FF8 381 HSP90AB2P
-P04259 564 KRT6B
-P02538 564 KRT6A
-P48668 564 KRT6C
-P04264 644 KRT1
-Q96P48 1450 ARAP1
-Q12774 1597 ARHGEF5
-P18433 802 PTPRA
-Q07021 282 C1QBP
-P42338 1070 PIK3CB
-Q96NH3 1257 TBC1D32
-P33992 734 MCM5
-P11021 654 HSPA5
-P13645 584 KRT10
-O95831 613 AIFM1
-O00567 594 NOP56
-P57088 247 TMEM33
-O95782 977 AP2A1
-O94973 939 AP2A2
-O15482 410 TEX28
-P05109 93 S100A8
-O60716 968 CTNND1
-P07437 444 TUBB
-P42704 1394 LRPPRC
-P38646 679 HSPA9
-P35908 639 KRT2
-Q01546 638 KRT76
-P19013 534 KRT4
-P11142 646 HSPA8
-P54652 639 HSPA2
-Q8TEM1 1887 NUP210
-P62993 217 GRB2
-P00533 1210 EGFR
-Q15751 4861 HERC1
-P68363 451 TUBA1B
-Q71U36 451 TUBA1A
-Q13748 450 TUBA3C
-Q6PEY2 450 TUBA3E
-Q9NY65 449 TUBA8
-P68366 448 TUBA4A
-A5A3E0 1075 POTEF
-P0CG38 1075 POTEI
-Q6S8J3 1075 POTEE
-P68032 377 ACTC1
-P68133 377 ACTA1
-P60709 375 ACTB
-P63261 375 ACTG1
-Q9BYX7 375 POTEKP
-P62736 377 ACTA2
-P63267 376 ACTG2
-Q9BQE3 449 TUBA1C
-Q99615 494 DNAJC7
-P82930 218 MRPS34
-P35568 1242 IRS1
-Q8WX94 980 NLRP7
-P31948 543 STIP1
-Q7Z3Y7 464 KRT28
-Q7Z3Y8 459 KRT27
-Q7Z3Z0 450 KRT25
-P02533 472 KRT14
-O00329 1044 PIK3CD
-P12236 298 SLC25A6
-P05141 298 SLC25A5
-P42336 1068 PIK3CA
-Q8WUY1 208 THEM6
-Q6IE37 1185 OVOS1
-Q9UBL6 633 CPNE7
-Q9HCH3 593 CPNE5
-Q86YQ8 564 CPNE8
-O95741 557 CPNE6
-Q96A23 557 CPNE4
-Q8IYJ1 553 CPNE9
-Q96FN4 548 CPNE2
-O75131 537 CPNE3
-P49411 452 TUFM
-P08581 1390 MET
-P43246 934 MSH2
-Q8NEG7 585 DENND6B
-P62258 255 YWHAE
-P31947 248 SFN
-P61981 247 YWHAG
-Q04917 246 YWHAH
-P63104 245 YWHAZ
-P27348 245 YWHAQ
-Q92552 414 MRPS27
-Q14451 532 GRB7
-Q02978 314 SLC25A11
-Q0VFZ6 552 CCDC173
-Q07889 1333 SOS1
-Q07890 1332 SOS2
-P22681 906 CBL
-Q05639 463 EEF1A2
-P68104 462 EEF1A1
-Q5VTE0 462 EEF1A1P5
-P52735 878 VAV2
-Q4G1C9 344 GLIPR1L2
-P21860 1342 ERBB3
-Q8NFI3 743 ENGASE
-Q14571 2701 ITPR2
-P42224 750 STAT1
-Q75V66 913 ANO5
-P0CG48 685 UBC
-P0CG47 229 UBB
-P62979 156 RPS27A
-P62987 128 UBA52
-P29353 583 SHC1
-Q7Z794 578 KRT77
-Q86Y46 540 KRT73
-P12035 628 KRT3
-Q9NSB2 600 KRT84
-Q7RTS7 529 KRT74
-Q3SY84 523 KRT71
-Q14CN4 511 KRT72
-O95678 551 KRT75
-Q5XKE5 535 KRT79
-P05787 483 KRT8
-P13647 590 KRT5
-P08729 469 KRT7
-Q06124 597 PTPN11
-P17066 643 HSPA6
-P48741 367 HSPA7
-P53680 142 AP2S1
-P69905 142 HBA1
-P40763 770 STAT3
-A6NK06 481 IRG1
-Q86WR7 435 PROSER2
-P02768 609 ALB
-P78527 4128 PRKDC
-P35527 623 KRT9
-P04626 1255 ERBB2
-O00264 195 PGRMC1
-P12235 298 SLC25A4
-P43304 727 GPD2
-Q8NDL9 886 AGBL5
-P68371 445 TUBB4B
-Q13885 445 TUBB2A
-Q9BVA1 445 TUBB2B
-Q13509 450 TUBB3
-Q06830 199 PRDX1
-Q13162 271 PRDX4
-P46109 303 CRKL
-P07355 339 ANXA2
-A6NMY6 339 ANXA2P2
-Q9GZT3 109 SLIRP
-P62249 146 RPS16
-P14678 240 SNRPB
-Q8TD57 4116 DNAH3
-Q58FF7 597 HSP90AB3P
-Q9Y2R5 130 MRPS17
-Q58FG0 334 HSP90AA5P
-P98077 582 SHC2
-Q99611 448 SEPHS2
-P11802 303 CDK4
-P08779 473 KRT16
-Q9NS86 450 LANCL2
-P61978 463 HNRNPK
-Q15366 365 PCBP2
-Q13191 982 CBLB
-Q4G0P3 5121 HYDIN
-Q6P1M0 643 SLC27A4
-P51648 485 ALDH3A2
-P13646 458 KRT13
-Q8IXB1 793 DNAJC10
-P04350 444 TUBB4A
-P62269 152 RPS18
-P62829 140 RPL23
-P10809 573 HSPD1
-Q14116 193 IL18
-Q5T9A4 648 ATAD3B
-Q9NVI7 634 ATAD3A
-Q5T2N8 411 ATAD3C
-P08727 400 KRT19
-P05783 430 KRT18
-P0CG39 1038 POTEJ
-O43196 834 MSH5
-P63173 70 RPL38
-Q6URK8 271 TEPP
-Q99456 494 KRT12
-P19012 456 KRT15
-Q04695 432 KRT17
-A6NNZ2 444 NA
-Q3ZCM7 444 TUBB8
-Q9H4B7 451 TUBB1
-Q9NP72 206 RAB18
-Q86SQ7 713 SDCCAG8
-Q2M243 656 CCDC27
-Q96K76 1375 USP47
-Q15165 354 PON2
-Q9BYK8 2649 HELZ2
-Q16543 378 CDC37
-Q8WXH0 6885 SYNE2
-Q9UJM3 462 ERRFI1
-O00461 696 GOLIM4
-Q05655 676 PRKCD
-A1L190 88 SYCE3
-P16144 1822 ITGB4
-O95816 211 BAG2
-Q99623 299 PHB2
-Q5JWF2 1037 GNAS
-P63092 394 GNAS
-P38405 381 GNAL
-P04899 355 GNAI2
-A8MTJ3 354 GNAT3
-P08754 354 GNAI3
-P09471 354 GNAO1
-P19087 354 GNAT2
-P63096 354 GNAI1
-P11488 350 GNAT1
-Q92569 461 PIK3R3
-Q8NF37 534 LPCAT1
-Q6Y7W6 1299 GIGYF2
-P49757 651 NUMB
-Q9Y6R0 609 NUMBL
-P37235 193 HPCAL1
-P61601 193 NCALD
-P84074 193 HPCA
-Q53GA4 152 PHLDA2
-Q63ZY3 851 KANK2
-Q6PIJ6 1188 FBXO38
-Q15257 358 PPP2R4
-Q96BR5 231 COA7
-P14923 745 JUP
-P35222 781 CTNNB1
-Q8IV45 518 UNC5CL
-Q86VU5 262 COMTD1
-Q9C0F3 470 ZNF436
-Q69YG0 159 TMEM42
-O94808 682 GFPT2
-Q03989 594 ARID5A
-P30825 629 SLC7A1
-Q9NU02 776 ANKEF1
-Q9UBF8 816 PI4KB
-Q9BWG4 385 SSBP4
-Q9Y6F6 885 MRVI1
-Q96JB1 4490 DNAH8
-P06702 114 S100A9
-Q99575 1024 POP1
-Q9H069 523 LRRC48
-P60953 191 CDC42
-Q03001 7570 DST
-Q9UPN3 7388 MACF1
-Q5VZP5 1158 DUSP27
-A6NCF5 533 KLHL33
-A6NMZ7 2263 COL6A6
-P35498 2009 SCN1A
-Q9BWN1 585 PRR14
-Q8IWK6 1321 GPR125
-P27986 724 PIK3R1
-Q6NUN0 579 ACSM5
-P68871 147 HBB
-Q8WV24 401 PHLDA1
-Q9HCY8 104 S100A14
-Q6PKX4 331 DOK6
-O15440 1437 ABCC5
-O75592 4640 MYCBP2
-P61626 148 LYZ
-P11274 1271 BCR
-Q12979 859 ABR
-Q8IW35 865 CEP97
-Q5D862 2391 FLG2
-P49368 545 CCT3
-Q53GQ0 312 HSD17B12
-P25705 553 ATP5A1
-Q15084 440 PDIA6
-E9PKD4 350 NPIPA5
-Q13946 482 PDE7A
-P25205 808 MCM3
-Q9Y4H2 1338 IRS2
-P62266 143 RPS23
-Q6ZU80 1094 CEP128
-Q92859 1461 NEO1
-P62805 103 HIST1H4A
-P13639 858 EEF2
-Q58FF6 505 HSP90AB4P
-Q8WXI4 607 ACOT11
-P35030 304 PRSS3
-Q15303 1308 ERBB4
-Q8NF91 8797 SYNE1
-Q3BBV2 869 NBPF8
-Q86T75 865 NBPF11
-Q7Z3Y9 468 KRT26
-P02042 147 HBD
-Q9H0C2 315 SLC25A31
-P15924 2871 DSP
b
diff -r 073027792d24 -r 0ec43f423131 test_files/SAINT_list_MQ.txt
--- a/test_files/SAINT_list_MQ.txt Tue Mar 15 15:24:30 2016 -0400
+++ /dev/null Thu Jan 01 00:00:00 1970 +0000
b
b'@@ -1,2337 +0,0 @@\n-Bait\tPrey\tPreyGene\tSpec\tSpecSum\tAvgSpec\tNumReplicates\tctrlCounts\tAvgP\tMaxP\tTopoAvgP\tTopoMaxP\tSaintScore\tlogOddsScore\tFoldChange\tBFDR\tboosted_by\n-HCC827_EGFR\tQ8WVM8\tSCFD1\t9984|59179|5317|64505\t7913\t1978.25\t4\t0|0|0|0\t1.00\t1.00\t1.00\t1.00\t1.00\tinf\t19782.50\t0.00\t\n-HCC827_EGFR\tQ13049\tTRIM32\t63294|45347|64976|186\t42731\t10682.75\t4\t0|0|0|0\t1.00\t1.00\t1.00\t1.00\t1.00\t268.55\t106827.50\t0.00\t\n-HCC827_EGFR\tP35232\tPHB\t31268|8369|0|0\t39637\t9909.25\t4\t0|0|0|0\t0.50\t1.00\t0.50\t1.00\t0.50\t-0.30\t99092.50\t0.09\t\n-HCC827_EGFR\tO00459\tPIK3R2\t0|0|0|0\t0\t0.00\t4\t0|0|0|0\t0.00\t0.00\t0.00\t0.00\t0.00\t-0.30\t0.00\t0.47\t\n-HCC827_EGFR\tP09382\tLGALS1\t37826|14686|5312|23502\t15790\t3947.50\t4\t0|0|0|0\t1.00\t1.00\t1.00\t1.00\t1.00\tinf\t39475.00\t0.00\t\n-HCC827_EGFR\tP07900\tHSP90AA1\t50881|43860|15099|35942\t14710\t3677.50\t4\t0|0|0|0\t1.00\t1.00\t1.00\t1.00\t1.00\tinf\t36775.00\t0.00\t\n-HCC827_EGFR\tQ14568\tHSP90AA2\t40462|33272|13998|37388\t59584\t14896.00\t4\t0|0|0|0\t1.00\t1.00\t1.00\t1.00\t1.00\tinf\t148960.00\t0.00\t\n-HCC827_EGFR\tP08238\tHSP90AB1\t41846|62278|20786|17926\t11764\t2941.00\t4\t0|0|0|0\t1.00\t1.00\t1.00\t1.00\t1.00\tinf\t29410.00\t0.00\t\n-HCC827_EGFR\tQ58FF8\tHSP90AB2P\t47963|48174|13838|410\t44849\t11212.25\t4\t0|0|0|0\t1.00\t1.00\t1.00\t1.00\t1.00\t583.91\t112122.50\t0.00\t\n-HCC827_EGFR\tP04259\tKRT6B\t0|0|50878|61136\t46478\t11619.50\t4\t0|0|49888|0\t0.02\t0.08\t0.02\t0.08\t0.02\t-inf\t0.93\t0.44\t\n-HCC827_EGFR\tP02538\tKRT6A\t0|0|52999|61378\t48841\t12210.25\t4\t0|0|40682|0\t0.50\t1.00\t0.50\t1.00\t0.50\t-inf\t1.20\t0.27\t\n-HCC827_EGFR\tP48668\tKRT6C\t0|0|52999|61378\t48841\t12210.25\t4\t0|0|40682|0\t0.50\t1.00\t0.50\t1.00\t0.50\t-inf\t1.20\t0.27\t\n-HCC827_EGFR\tP04264\tKRT1\t0|0|2243|8125\t10368\t2592.00\t4\t7640|7702|3873|7900\t0.00\t0.00\t0.00\t0.00\t0.00\t-inf\t0.38\t0.47\t\n-HCC827_EGFR\tQ96P48\tARAP1\t0|0|0|0\t0\t0.00\t4\t0|0|0|0\t0.00\t0.00\t0.00\t0.00\t0.00\t-0.30\t0.00\t0.47\t\n-HCC827_EGFR\tQ12774\tARHGEF5\t0|0|0|0\t0\t0.00\t4\t0|0|0|0\t0.00\t0.00\t0.00\t0.00\t0.00\t-0.30\t0.00\t0.47\t\n-HCC827_EGFR\tP18433\tPTPRA\t0|0|0|0\t0\t0.00\t4\t0|0|0|0\t0.00\t0.00\t0.00\t0.00\t0.00\t-0.30\t0.00\t0.47\t\n-HCC827_EGFR\tQ07021\tC1QBP\t0|0|0|0\t0\t0.00\t4\t52708|10556|0|0\t0.00\t0.00\t0.00\t0.00\t0.00\t-inf\t0.00\t0.47\t\n-HCC827_EGFR\tP42338\tPIK3CB\t0|0|0|0\t0\t0.00\t4\t0|0|0|0\t0.00\t0.00\t0.00\t0.00\t0.00\t-0.30\t0.00\t0.47\t\n-HCC827_EGFR\tQ96NH3\tTBC1D32\t46324|49524|42956|59440\t1636\t409.00\t4\t2724|48324|59034|63394\t0.25\t1.00\t0.25\t1.00\t0.25\t-inf\t0.04\t0.43\t\n-HCC827_EGFR\tP33992\tMCM5\t0|0|0|0\t0\t0.00\t4\t0|0|0|0\t0.00\t0.00\t0.00\t0.00\t0.00\t-0.30\t0.00\t0.47\t\n-HCC827_EGFR\tP11021\tHSPA5\t52870|36357|25793|32764\t16712\t4178.00\t4\t0|0|0|0\t1.00\t1.00\t1.00\t1.00\t1.00\tinf\t41780.00\t0.00\t\n-HCC827_EGFR\tP13645\tKRT10\t0|0|16580|16332\t32912\t8228.00\t4\t0|0|0|0\t0.50\t1.00\t0.50\t1.00\t0.50\t-0.30\t82280.00\t0.09\t\n-HCC827_EGFR\tO95831\tAIFM1\t0|193|0|170\t363\t90.75\t4\t0|0|0|0\t0.50\t1.00\t0.50\t1.00\t0.50\t-0.30\t907.50\t0.09\t\n-HCC827_EGFR\tO00567\tNOP56\t0|0|0|0\t0\t0.00\t4\t0|0|0|0\t0.00\t0.00\t0.00\t0.00\t0.00\t-0.30\t0.00\t0.47\t\n-HCC827_EGFR\tP57088\tTMEM33\t213|275|207|208\t903\t225.75\t4\t0|0|0|0\t1.00\t1.00\t1.00\t1.00\t1.00\t298.16\t2257.50\t0.00\t\n-HCC827_EGFR\tO95782\tAP2A1\t16769|13264|63408|7280\t35185\t8796.25\t4\t0|0|0|0\t1.00\t1.00\t1.00\t1.00\t1.00\tinf\t87962.50\t0.00\t\n-HCC827_EGFR\tO94973\tAP2A2\t358|388|348|358\t1452\t363.00\t4\t0|0|0|0\t1.00\t1.00\t1.00\t1.00\t1.00\t496.70\t3630.00\t0.00\t\n-HCC827_EGFR\tO15482\tTEX28\t19608|41880|22436|5536\t23924\t5981.00\t4\t6272|47616|0|57765\t0.00\t0.00\t0.00\t0.00\t0.00\t-inf\t0.52\t0.47\t\n-HCC827_EGFR\tP05109\tS100A8\t0|0|0|0\t0\t0.00\t4\t0|0|43963|46303\t0.00\t0.00\t0.00\t0.00\t0.00\t-inf\t0.00\t0.47\t\n-HCC827_EGFR\tO60716\tCTNND1\t12031|15793|0|0\t27824\t6956.00\t4\t0|0|0|0\t0.50\t1.00\t0.50\t1.00\t0.50\t-0.30\t69560.00\t0.09\t\n-HCC827_EGFR\tP07437\tTUBB\t22694|20499|64837|17647\t60141\t15035.25\t4\t0|0|0|0\t1.00\t1.00\t1.00\t1.00\t1.00\tinf\t150352.50\t0.00\t\n-HCC827_EGFR\tP42704\tLRPPRC\t33281|55826|7360|4965\t35896\t8974.00\t4\t0|0|0|0\t1.00\t1.00\t1.00\t1.00\t1.00\tinf\t89740.00\t0.00\t\n-HCC827_EGFR\tP38646\tHSPA9\t43436|1342|32934|29286\t41462\t10365.50\t4\t0|0|0|0\t1.00\t1.00\t1.00\t1.00\t1.00\tinf\t103655.00\t0.00\t\n-HCC827_EGFR\tP35908\tKRT2\t0|0|43324|18720\t62044\t15511.00\t4\t0|0|0|0\t0.50\t1.00\t0.50\t1.00\t0.50\t-0.30\t155110.00\t0.09\t\n-HCC827_EGFR\tQ01546\tKRT76\t0|0|12147|62401\t9012\t2253.00\t4\t0|0|46419|37'..b'00\t0.47\t\n-HCC827ER_P85B\tQ9BWN1\tPRR14\t0|0|0|0\t0\t0.00\t4\t0|0|0|0\t0.00\t0.00\t0.00\t0.00\t0.00\t-0.30\t0.00\t0.47\t\n-HCC827ER_P85B\tQ8IWK6\tGPR125\t0|0|0|0\t0\t0.00\t4\t0|0|0|0\t0.00\t0.00\t0.00\t0.00\t0.00\t-0.30\t0.00\t0.47\t\n-HCC827ER_P85B\tP27986\tPIK3R1\t18221|42382|40367|32176\t2074\t518.50\t4\t0|0|0|0\t1.00\t1.00\t1.00\t1.00\t1.00\tinf\t5185.00\t0.00\t\n-HCC827ER_P85B\tQ6N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b
diff -r 073027792d24 -r 0ec43f423131 test_files/SC_SAINT_list.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test_files/SC_SAINT_list.txt Tue Mar 15 15:24:52 2016 -0400
b
b'@@ -0,0 +1,473 @@\n+Bait\tPrey\tPreyGene\tSpec\tSpecSum\tAvgSpec\tNumReplicates\tctrlCounts\tAvgP\tMaxP\tTopoAvgP\tTopoMaxP\tSaintScore\tlogOddsScore\tFoldChange\tBFDR\tboosted_by\n+WT_EGFR\tEGFR_HUMAN\tEGFR\t67|52|45|55\t219\t54.75\t4\t0|0|0|0\t1.00\t1.00\t1.00\t1.00\t1.00\t68.87\t547.50\t0.00\t\n+WT_EGFR\tERBB2_HUMAN\tERBB2\t4|5|3|5\t17\t4.25\t4\t0|0|0|0\t1.00\t1.00\t1.00\t1.00\t1.00\t6.28\t42.50\t0.00\t\n+WT_EGFR\tP85B_HUMAN\tPIK3R2\t0|0|0|0\t0\t0.00\t4\t0|0|0|0\t0.00\t0.00\t0.00\t0.00\t0.00\t-0.11\t0.00\t0.51\t\n+WT_EGFR\tP55G_HUMAN\tPIK3R3\t0|0|0|0\t0\t0.00\t4\t0|0|0|0\t0.00\t0.00\t0.00\t0.00\t0.00\t-0.11\t0.00\t0.51\t\n+WT_EGFR\tP85A_HUMAN\tPIK3R1\t0|0|0|0\t0\t0.00\t4\t0|0|0|0\t0.00\t0.00\t0.00\t0.00\t0.00\t-0.11\t0.00\t0.51\t\n+WT_EGFR\tK2C1_HUMAN\tKRT1\t3|4|6|5\t18\t4.50\t4\t10|10|7|7\t0.00\t0.00\t0.00\t0.00\t0.00\t-27.06\t0.53\t0.51\t\n+WT_EGFR\tK1C10_HUMAN\tKRT10\t2|0|3|3\t8\t2.00\t4\t1|2|4|3\t0.01\t0.02\t0.01\t0.02\t0.01\t-9.56\t0.80\t0.49\t\n+WT_EGFR\tK1C16_HUMAN\tKRT16\t0|0|2|1\t3\t0.75\t4\t1|1|2|2\t0.03\t0.12\t0.03\t0.12\t0.03\t-5.35\t0.50\t0.47\t\n+WT_EGFR\tGRB2_HUMAN\tGRB2\t2|0|2|2\t6\t1.50\t4\t0|0|0|0\t0.74\t0.99\t0.74\t0.99\t0.74\t-0.11\t15.00\t0.05\t\n+WT_EGFR\tGRP78_HUMAN\tHSPA5\t16|14|11|12\t53\t13.25\t4\t0|0|0|0\t1.00\t1.00\t1.00\t1.00\t1.00\t19.16\t132.50\t0.00\t\n+WT_EGFR\tK22E_HUMAN\tKRT2\t2|3|6|4\t15\t3.75\t4\t4|4|1|1\t0.15\t0.50\t0.15\t0.50\t0.15\t-5.61\t1.50\t0.44\t\n+WT_EGFR\tK2C8_HUMAN\tKRT8\t1|1|2|2\t6\t1.50\t4\t0|0|0|0\t0.49\t0.99\t0.49\t0.99\t0.49\t2.40\t15.00\t0.19\t\n+WT_EGFR\tK2C5_HUMAN\tKRT5\t1|1|3|2\t7\t1.75\t4\t1|1|2|0\t0.29\t0.74\t0.29\t0.74\t0.29\t-1.74\t1.75\t0.26\t\n+WT_EGFR\tK2C4_HUMAN\tKRT4\t0|0|0|0\t0\t0.00\t4\t0|1|0|0\t0.00\t0.00\t0.00\t0.00\t0.00\t-0.65\t0.00\t0.51\t\n+WT_EGFR\tK2C6B_HUMAN\tKRT6B\t1|2|4|4\t11\t2.75\t4\t2|2|2|1\t0.25\t0.47\t0.25\t0.47\t0.25\t-4.44\t1.57\t0.42\t\n+WT_EGFR\tK2C7_HUMAN\tKRT7\t0|0|0|2\t2\t0.50\t4\t0|0|0|0\t0.25\t0.99\t0.25\t0.99\t0.25\t-0.11\t5.00\t0.28\t\n+WT_EGFR\tHSP7C_HUMAN\tHSPA8\t15|10|12|11\t48\t12.00\t4\t0|0|1|1\t1.00\t1.00\t1.00\t1.00\t1.00\t12.83\t24.00\t0.00\t\n+WT_EGFR\tPK3CA_HUMAN\tPIK3CA\t0|0|0|0\t0\t0.00\t4\t0|0|0|0\t0.00\t0.00\t0.00\t0.00\t0.00\t-0.11\t0.00\t0.51\t\n+WT_EGFR\tERBB3_HUMAN\tERBB3\t0|0|0|0\t0\t0.00\t4\t0|0|0|0\t0.00\t0.00\t0.00\t0.00\t0.00\t-0.11\t0.00\t0.51\t\n+WT_EGFR\tADT2_HUMAN\tSLC25A5\t5|3|5|5\t18\t4.50\t4\t0|0|0|0\t1.00\t1.00\t1.00\t1.00\t1.00\t6.28\t45.00\t0.00\t\n+WT_EGFR\tADT3_HUMAN\tSLC25A6\t5|4|5|5\t19\t4.75\t4\t0|0|0|0\t1.00\t1.00\t1.00\t1.00\t1.00\t8.02\t47.50\t0.00\t\n+WT_EGFR\tK1C9_HUMAN\tKRT9\t1|1|1|0\t3\t0.75\t4\t0|0|1|0\t0.00\t0.00\t0.00\t0.00\t0.00\t-0.65\t3.00\t0.51\t\n+WT_EGFR\tTBA1A_HUMAN\tTUBA1A\t5|3|5|3\t16\t4.00\t4\t0|0|0|0\t1.00\t1.00\t1.00\t1.00\t1.00\t6.28\t40.00\t0.00\t\n+WT_EGFR\tTBA4A_HUMAN\tTUBA4A\t3|2|3|1\t9\t2.25\t4\t0|0|0|0\t0.75\t1.00\t0.75\t1.00\t0.75\t2.40\t22.50\t0.02\t\n+WT_EGFR\tARHG5_HUMAN\tARHGEF5\t0|0|0|0\t0\t0.00\t4\t0|0|0|0\t0.00\t0.00\t0.00\t0.00\t0.00\t-0.11\t0.00\t0.51\t\n+WT_EGFR\tPK3CB_HUMAN\tPIK3CB\t0|0|0|0\t0\t0.00\t4\t0|0|0|0\t0.00\t0.00\t0.00\t0.00\t0.00\t-0.11\t0.00\t0.51\t\n+WT_EGFR\tIRS1_HUMAN\tIRS1\t0|0|0|0\t0\t0.00\t4\t0|0|0|0\t0.00\t0.00\t0.00\t0.00\t0.00\t-0.11\t0.00\t0.51\t\n+WT_EGFR\tTBB5_HUMAN\tTUBB\t8|6|5|2\t21\t5.25\t4\t0|0|0|0\t1.00\t1.00\t1.00\t1.00\t1.00\t4.43\t52.50\t0.00\t\n+WT_EGFR\tTBB3_HUMAN\tTUBB3\t2|2|3|1\t8\t2.00\t4\t0|0|0|0\t0.74\t1.00\t0.74\t1.00\t0.74\t2.40\t20.00\t0.05\t\n+WT_EGFR\tHS90A_HUMAN\tHSP90AA1\t3|3|1|2\t9\t2.25\t4\t0|0|0|0\t0.75\t1.00\t0.75\t1.00\t0.75\t2.40\t22.50\t0.02\t\n+WT_EGFR\tHS90B_HUMAN\tHSP90AB1\t4|2|1|2\t9\t2.25\t4\t0|0|0|0\t0.74\t1.00\t0.74\t1.00\t0.74\t2.40\t22.50\t0.04\t\n+WT_EGFR\t1433E_HUMAN\tYWHAE\t1|0|0|0\t1\t0.25\t4\t0|0|0|0\t0.00\t0.00\t0.00\t0.00\t0.00\t-0.11\t2.50\t0.51\t\n+WT_EGFR\t1433T_HUMAN\tYWHAQ\t1|0|0|0\t1\t0.25\t4\t0|0|0|0\t0.00\t0.00\t0.00\t0.00\t0.00\t-0.11\t2.50\t0.51\t\n+WT_EGFR\tLPPRC_HUMAN\tLRPPRC\t1|3|3|3\t10\t2.50\t4\t0|0|0|0\t0.75\t1.00\t0.75\t1.00\t0.75\t2.40\t25.00\t0.00\t\n+WT_EGFR\tERRFI_HUMAN\tERRFI1\t1|2|1|1\t5\t1.25\t4\t0|0|0|0\t0.25\t0.99\t0.25\t0.99\t0.25\t2.40\t12.50\t0.28\t\n+WT_EGFR\tAP2A1_HUMAN\tAP2A1\t1|1|1|1\t4\t1.00\t4\t0|0|0|0\t0.00\t0.00\t0.00\t0.00\t0.00\t2.40\t10.00\t0.51\t\n+WT_EGFR\tGRB7_HUMAN\tGRB7\t0|0|0|0\t0\t0.00\t4\t0|0|0|0\t0.00\t0.00\t0.00\t0.00\t0.00\t-0.11\t0.00\t0.51\t\n+WT_EGFR\tSTAT3_HUMAN\tSTAT3\t4|5|3|3\t15\t3.75\t4\t0|0|0|0\t1.00\t1.00\t1.00\t1.00\t1.00\t6.28\t37.50\t0.00\t\n+WT_EGFR\tANXA2_HUMAN\tANXA2\t3|4|0|1\t8\t2.00\t4\t0|0|0|0\t0.50\t1.00\t0.50\t1.00\t0.50\t-0.11\t20.00\t0.10\t\n+WT_EGFR\tPTPRA_HUMAN\tPTPRA\t0|0|0|0\t0\t0.00\t4\t0|0|0|0\t0.00\t0.00\t0.00\t0.00\t0.00\t-0.11\t0.00\t0.51\t\n+WT_EGFR\tC1QBP_HUMAN\tC1QBP\t0|0|0|0\t0\t0.00\t4\t7|'..b'\t0|0|1|1\t0.00\t0.00\t0.00\t0.00\t0.00\t-1.55\t1.00\t0.51\t\n+ER_P85B\tPK3CA_HUMAN\tPIK3CA\t3|3|6|6\t18\t4.50\t4\t0|0|0|0\t1.00\t1.00\t1.00\t1.00\t1.00\t6.28\t45.00\t0.00\t\n+ER_P85B\tERBB3_HUMAN\tERBB3\t1|0|2|1\t4\t1.00\t4\t0|0|0|0\t0.25\t0.99\t0.25\t0.99\t0.25\t-0.11\t10.00\t0.28\t\n+ER_P85B\tADT2_HUMAN\tSLC25A5\t0|0|0|0\t0\t0.00\t4\t0|0|0|0\t0.00\t0.00\t0.00\t0.00\t0.00\t-0.11\t0.00\t0.51\t\n+ER_P85B\tADT3_HUMAN\tSLC25A6\t0|0|0|0\t0\t0.00\t4\t0|0|0|0\t0.00\t0.00\t0.00\t0.00\t0.00\t-0.11\t0.00\t0.51\t\n+ER_P85B\tK1C9_HUMAN\tKRT9\t1|0|1|0\t2\t0.50\t4\t0|0|1|0\t0.00\t0.00\t0.00\t0.00\t0.00\t-0.65\t2.00\t0.51\t\n+ER_P85B\tTBA1A_HUMAN\tTUBA1A\t0|0|0|0\t0\t0.00\t4\t0|0|0|0\t0.00\t0.00\t0.00\t0.00\t0.00\t-0.11\t0.00\t0.51\t\n+ER_P85B\tTBA4A_HUMAN\tTUBA4A\t0|0|0|0\t0\t0.00\t4\t0|0|0|0\t0.00\t0.00\t0.00\t0.00\t0.00\t-0.11\t0.00\t0.51\t\n+ER_P85B\tARHG5_HUMAN\tARHGEF5\t0|0|0|0\t0\t0.00\t4\t0|0|0|0\t0.00\t0.00\t0.00\t0.00\t0.00\t-0.11\t0.00\t0.51\t\n+ER_P85B\tPK3CB_HUMAN\tPIK3CB\t1|1|4|2\t8\t2.00\t4\t0|0|0|0\t0.50\t1.00\t0.50\t1.00\t0.50\t2.40\t20.00\t0.14\t\n+ER_P85B\tIRS1_HUMAN\tIRS1\t2|3|3|4\t12\t3.00\t4\t0|0|0|0\t1.00\t1.00\t1.00\t1.00\t1.00\t4.43\t30.00\t0.00\t\n+ER_P85B\tTBB5_HUMAN\tTUBB\t0|0|0|0\t0\t0.00\t4\t0|0|0|0\t0.00\t0.00\t0.00\t0.00\t0.00\t-0.11\t0.00\t0.51\t\n+ER_P85B\tTBB3_HUMAN\tTUBB3\t0|0|0|0\t0\t0.00\t4\t0|0|0|0\t0.00\t0.00\t0.00\t0.00\t0.00\t-0.11\t0.00\t0.51\t\n+ER_P85B\tHS90A_HUMAN\tHSP90AA1\t0|0|0|0\t0\t0.00\t4\t0|0|0|0\t0.00\t0.00\t0.00\t0.00\t0.00\t-0.11\t0.00\t0.51\t\n+ER_P85B\tHS90B_HUMAN\tHSP90AB1\t0|0|0|0\t0\t0.00\t4\t0|0|0|0\t0.00\t0.00\t0.00\t0.00\t0.00\t-0.11\t0.00\t0.51\t\n+ER_P85B\t1433E_HUMAN\tYWHAE\t0|0|1|1\t2\t0.50\t4\t0|0|0|0\t0.00\t0.00\t0.00\t0.00\t0.00\t-0.11\t5.00\t0.51\t\n+ER_P85B\t1433T_HUMAN\tYWHAQ\t0|0|1|1\t2\t0.50\t4\t0|0|0|0\t0.00\t0.00\t0.00\t0.00\t0.00\t-0.11\t5.00\t0.51\t\n+ER_P85B\tLPPRC_HUMAN\tLRPPRC\t0|0|0|0\t0\t0.00\t4\t0|0|0|0\t0.00\t0.00\t0.00\t0.00\t0.00\t-0.11\t0.00\t0.51\t\n+ER_P85B\tERRFI_HUMAN\tERRFI1\t0|0|0|0\t0\t0.00\t4\t0|0|0|0\t0.00\t0.00\t0.00\t0.00\t0.00\t-0.11\t0.00\t0.51\t\n+ER_P85B\tAP2A1_HUMAN\tAP2A1\t0|0|0|0\t0\t0.00\t4\t0|0|0|0\t0.00\t0.00\t0.00\t0.00\t0.00\t-0.11\t0.00\t0.51\t\n+ER_P85B\tGRB7_HUMAN\tGRB7\t1|1|1|0\t3\t0.75\t4\t0|0|0|0\t0.00\t0.00\t0.00\t0.00\t0.00\t-0.11\t7.50\t0.51\t\n+ER_P85B\tSTAT3_HUMAN\tSTAT3\t0|0|0|0\t0\t0.00\t4\t0|0|0|0\t0.00\t0.00\t0.00\t0.00\t0.00\t-0.11\t0.00\t0.51\t\n+ER_P85B\tANXA2_HUMAN\tANXA2\t0|0|0|0\t0\t0.00\t4\t0|0|0|0\t0.00\t0.00\t0.00\t0.00\t0.00\t-0.11\t0.00\t0.51\t\n+ER_P85B\tPTPRA_HUMAN\tPTPRA\t0|0|0|0\t0\t0.00\t4\t0|0|0|0\t0.00\t0.00\t0.00\t0.00\t0.00\t-0.11\t0.00\t0.51\t\n+ER_P85B\tC1QBP_HUMAN\tC1QBP\t0|0|0|0\t0\t0.00\t4\t7|5|0|0\t0.00\t0.00\t0.00\t0.00\t0.00\t-11.03\t0.00\t0.51\t\n+ER_P85B\tSHC1_HUMAN\tSHC1\t0|0|0|0\t0\t0.00\t4\t0|0|0|0\t0.00\t0.00\t0.00\t0.00\t0.00\t-0.11\t0.00\t0.51\t\n+ER_P85B\tPTN11_HUMAN\tPTPN11\t0|0|0|0\t0\t0.00\t4\t0|0|0|0\t0.00\t0.00\t0.00\t0.00\t0.00\t-0.11\t0.00\t0.51\t\n+ER_P85B\tPON2_HUMAN\tPON2\t0|0|0|0\t0\t0.00\t4\t0|0|0|0\t0.00\t0.00\t0.00\t0.00\t0.00\t-0.11\t0.00\t0.51\t\n+ER_P85B\tMET_HUMAN\tMET\t0|0|1|1\t2\t0.50\t4\t0|0|0|0\t0.00\t0.00\t0.00\t0.00\t0.00\t-0.11\t5.00\t0.51\t\n+ER_P85B\tCRKL_HUMAN\tCRKL\t0|0|0|0\t0\t0.00\t4\t0|0|0|0\t0.00\t0.00\t0.00\t0.00\t0.00\t-0.11\t0.00\t0.51\t\n+ER_P85B\tCBL_HUMAN\tCBL\t0|0|0|0\t0\t0.00\t4\t0|0|0|0\t0.00\t0.00\t0.00\t0.00\t0.00\t-0.11\t0.00\t0.51\t\n+ER_P85B\tPHLA2_HUMAN\tPHLDA2\t0|0|0|0\t0\t0.00\t4\t0|0|0|0\t0.00\t0.00\t0.00\t0.00\t0.00\t-0.11\t0.00\t0.51\t\n+ER_P85B\tRT27_HUMAN\tMRPS27\t0|0|0|0\t0\t0.00\t4\t0|0|0|0\t0.00\t0.00\t0.00\t0.00\t0.00\t-0.11\t0.00\t0.51\t\n+ER_P85B\tM2OM_HUMAN\tSLC25A11\t0|0|0|0\t0\t0.00\t4\t0|0|0|0\t0.00\t0.00\t0.00\t0.00\t0.00\t-0.11\t0.00\t0.51\t\n+ER_P85B\tSTAT1_HUMAN\tSTAT1\t0|0|0|0\t0\t0.00\t4\t0|0|0|0\t0.00\t0.00\t0.00\t0.00\t0.00\t-0.11\t0.00\t0.51\t\n+ER_P85B\tSLIRP_HUMAN\tSLIRP\t0|0|0|0\t0\t0.00\t4\t0|0|0|0\t0.00\t0.00\t0.00\t0.00\t0.00\t-0.11\t0.00\t0.51\t\n+ER_P85B\tPK3CD_HUMAN\tPIK3CD\t0|0|0|0\t0\t0.00\t4\t0|0|0|0\t0.00\t0.00\t0.00\t0.00\t0.00\t-0.11\t0.00\t0.51\t\n+ER_P85B\tGRP75_HUMAN\tHSPA9\t0|0|0|0\t0\t0.00\t4\t0|0|0|0\t0.00\t0.00\t0.00\t0.00\t0.00\t-0.11\t0.00\t0.51\t\n+ER_P85B\tAIFM1_HUMAN\tAIFM1\t0|0|0|0\t0\t0.00\t4\t0|0|0|0\t0.00\t0.00\t0.00\t0.00\t0.00\t-0.11\t0.00\t0.51\t\n+ER_P85B\tPHB_HUMAN\tPHB\t0|0|0|0\t0\t0.00\t4\t0|0|0|0\t0.00\t0.00\t0.00\t0.00\t0.00\t-0.11\t0.00\t0.51\t\n+ER_P85B\tHNRPK_HUMAN\tHNRNPK\t0|0|0|0\t0\t0.00\t4\t0|0|0|0\t0.00\t0.00\t0.00\t0.00\t0.00\t-0.11\t0.00\t0.51\t\n+ER_P85B\tTMM33_HUMAN\tTMEM33\t0|0|0|0\t0\t0.00\t4\t0|0|0|0\t0.00\t0.00\t0.00\t0.00\t0.00\t-0.11\t0.00\t0.51\t\n+ER_P85B\tRT34_HUMAN\tMRPS34\t0|0|0|0\t0\t0.00\t4\t0|0|0|0\t0.00\t0.00\t0.00\t0.00\t0.00\t-0.11\t0.00\t0.51\t\n'