| Previous changeset 3:a2d4da20749a (2024-02-26) Next changeset 5:0895b4ebcfc8 (2024-08-16) |
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Commit message:
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ampvis2 commit ab75ba7665d7fb5c18ad08dfbba92b273f991dfc |
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modified:
heatmap.xml macros.xml |
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| diff -r a2d4da20749a -r 14695ae019be heatmap.xml --- a/heatmap.xml Mon Feb 26 07:53:13 2024 +0000 +++ b/heatmap.xml Sat Mar 16 11:31:43 2024 +0000 |
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| @@ -200,7 +200,7 @@ <!-- defaults --> <test expect_num_outputs="1"> <param name="data" value="AalborgWWTPs.rds" ftype="ampvis2"/> - <output name="plot" value="AalborgWWTPs-heatmap.pdf" ftype="pdf"/> + <output name="plot" value="AalborgWWTPs-heatmap.pdf" ftype="pdf" compare="sim_size"/> </test> <!-- group and facet--> <test expect_num_outputs="1"> @@ -208,7 +208,7 @@ <param name="metadata_list" value="AalborgWWTPs-metadata.list"/> <param name="group_by" value="Plant"/> <param name="facet_by" value="Year"/> - <output name="plot_raw" value="AalborgWWTPs-heatmap-group-facet.pdf" ftype="pdf"/> + <output name="plot_raw" value="AalborgWWTPs-heatmap-group-facet.pdf" ftype="pdf" compare="sim_size"/> </test> <!-- group and facet and test raw output --> <test expect_num_outputs="1"> @@ -223,7 +223,7 @@ <test expect_num_outputs="1"> <param name="data" value="AalborgWWTPs.rds" ftype="ampvis2"/> <param name="normalise" value="true"/> - <output name="plot" value="AalborgWWTPs-heatmap-normalise.pdf" ftype="pdf"/> + <output name="plot" value="AalborgWWTPs-heatmap-normalise.pdf" ftype="pdf" compare="sim_size"/> </test> <!-- normalise by a specific sample --> <test expect_num_outputs="1"> @@ -231,7 +231,7 @@ <param name="metadata_list" value="AalborgWWTPs-metadata.list"/> <param name="normalise" value="true"/> <param name="normalise_by" value="16SAMP-747"/> - <output name="plot" value="AalborgWWTPs-heatmap-normalise_by_sample.pdf" ftype="pdf"/> + <output name="plot" value="AalborgWWTPs-heatmap-normalise_by_sample.pdf" ftype="pdf" compare="sim_size"/> </test> <!-- normalise by a metadata variable https://github.com/KasperSkytte/ampvis2/issues/168 --> @@ -252,7 +252,7 @@ <param name="tax_add" value="Class"/> <param name="tax_show" value="5"/> <param name="showRemainingTaxa" value="true"/> - <output name="plot" value="AalborgWWTPs-heatmap-tax.pdf" ftype="pdf"/> + <output name="plot" value="AalborgWWTPs-heatmap-tax.pdf" ftype="pdf" compare="sim_size"/> </test> <!-- sort by a specific sample --> <test expect_num_outputs="1"> @@ -262,7 +262,7 @@ <param name="sort_by_sel" value="sample"/> <param name="sort_by" value="16SAMP-747"/> </conditional> - <output name="plot" value="AalborgWWTPs-heatmap-sort_by_sample.pdf" ftype="pdf"/> + <output name="plot" value="AalborgWWTPs-heatmap-sort_by_sample.pdf" ftype="pdf" compare="sim_size"/> </test> <!-- sort by a group of samples --> <test expect_num_outputs="1"> @@ -273,7 +273,7 @@ <param name="sort_by_sel" value="group"/> <param name="sort_by" value="Winter"/> </conditional> - <output name="plot" value="AalborgWWTPs-heatmap-sort_by_group.pdf" ftype="pdf"/> + <output name="plot" value="AalborgWWTPs-heatmap-sort_by_group.pdf" ftype="pdf" compare="sim_size"/> </test> <test expect_num_outputs="1"> <param name="data" value="AalborgWWTPs.rds" ftype="ampvis2"/> @@ -282,7 +282,7 @@ <param name="plot_functions_sel" value="midasfieldguide"/> <param name="functions" value="MiDAS,Filamentous,AOB,NOB,GAO"/> </conditional> - <output name="plot" value="AalborgWWTPs-heatmap-plot_foo_midas.pdf" ftype="pdf"/> + <output name="plot" value="AalborgWWTPs-heatmap-plot_foo_midas.pdf" ftype="pdf" compare="sim_size"/> </test> <test expect_num_outputs="1"> <param name="data" value="AalborgWWTPs.rds" ftype="ampvis2"/> @@ -292,7 +292,7 @@ <param name="function_data" value="AalborgWWTPs-functions.tsv" ftype="tsv"/> <param name="functions" value="Foo,Bar"/> </conditional> - <output name="plot" value="AalborgWWTPs-heatmap-plot_foo_file.pdf" ftype="pdf"/> + <output name="plot" value="AalborgWWTPs-heatmap-plot_foo_file.pdf" ftype="pdf" compare="sim_size"/> </test> </tests> |
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| diff -r a2d4da20749a -r 14695ae019be macros.xml --- a/macros.xml Mon Feb 26 07:53:13 2024 +0000 +++ b/macros.xml Sat Mar 16 11:31:43 2024 +0000 |
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| @@ -1,6 +1,6 @@ <macros> <token name="@TOOL_VERSION@">2.8.6</token> - <token name="@VERSION_SUFFIX@">0</token> + <token name="@VERSION_SUFFIX@">1</token> <token name="@PROFILE@">22.01</token> <xml name="header"> <xrefs> |