| Previous changeset 3:f0de368eabca (2019-10-15) Next changeset 5:cdf4443d5625 (2020-01-29) |
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Commit message:
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/dropletutils/ commit 49840f36c6623746bb7f8eb64bf4bf0cdae9c24e" |
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modified:
dropletutils.xml |
| b |
| diff -r f0de368eabca -r 1797cbe967d1 dropletutils.xml --- a/dropletutils.xml Tue Oct 15 09:03:56 2019 -0400 +++ b/dropletutils.xml Thu Dec 05 01:32:29 2019 -0500 |
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| @@ -3,7 +3,7 @@ <description>Utilities for handling droplet-based single-cell RNA-seq data</description> <macros> <token name="@PACKAGE_VERSION@" >1.2.1</token> - <token name="@GALAXY_VERSION@" >4</token> + <token name="@GALAXY_VERSION@" >5</token> <token name="@TXIN@">tenx.input</token> <token name="@TXOUT@">tenx.output</token> <xml name="test_dirin" > @@ -19,6 +19,7 @@ <requirement type="package" version="@PACKAGE_VERSION@">bioconductor-dropletutils</requirement> <requirement type="package" version="1.2_17" >r-matrix</requirement> <requirement type="package" version="1.10.1" >bioconductor-scater</requirement> + <requirement type="package" version="1">fonts-conda-ecosystem</requirement> </requirements> <version_command><![CDATA[ Rscript -e 'packageVersion("DropletUtils")' | grep -oP '\d\.\d\.\d' @@ -202,7 +203,7 @@ <param name="use" value="barcode_rank" /> <param name="lower" value="120" /> </conditional> - <output name="plot" value="defs_barcoderankings.png" compare="sim_size" delta="200"/> + <output name="plot" value="defs_barcoderankings.png" compare="sim_size" delta="400"/> </test> <!-- ::: Empty Drops --> <test expect_num_outputs="3"> @@ -225,7 +226,7 @@ <has_line_matching expression="^998\sCATGAAGCAA\s151\s-166.644236503983\s9.99900009999e-05\sTRUE\s9.99900009999e-05\sTRUE\sTRUE" /> </assert_contents> </output> - <output name="plot" value="defs_emptydrops_150_0002.png" compare="sim_size" delta="100" /> + <output name="plot" value="defs_emptydrops_150_0002.png" compare="sim_size" delta="400" /> </test> <!-- Other format input tests --> <!-- ::: Empty Drops, same as above but input is h5ad --> @@ -243,7 +244,7 @@ <param name="fdr_thresh" value="0.02" /> </conditional> </conditional> - <output name="fileout_h5ad" value="defs_emptydrops_150_0002a.h5ad" compare="sim_size" delta="200" /> + <output name="fileout_h5ad" value="defs_emptydrops_150_0002a.h5ad" compare="sim_size" delta="400" /> <output name="table" > <assert_contents> <has_n_columns n="9" /> @@ -252,7 +253,7 @@ <has_line_matching expression="^1114\sTCCGAAGCAA\s182\s-196.181449214729\s9.99900009999e-05\sTRUE\s0.000126279506880773\sTRUE\sTRUE" /> </assert_contents> </output> - <output name="plot" value="defs_emptydrops_150_0002a.png" compare="sim_size" delta="100" /> + <output name="plot" value="defs_emptydrops_150_0002a.png" compare="sim_size" delta="400" /> </test> <!-- Output a directory --> <test expect_num_outputs="3"> |