| Previous changeset 2:e2389cdb9b1f (2019-07-03) Next changeset 4:6a92134a105b (2019-07-03) |
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Commit message:
Uploaded |
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modified:
dante.xml |
| b |
| diff -r e2389cdb9b1f -r 18d6c1c66798 dante.xml --- a/dante.xml Wed Jul 03 04:53:24 2019 -0400 +++ b/dante.xml Wed Jul 03 05:09:48 2019 -0400 |
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| @@ -3,6 +3,7 @@ <requirements> <requirement type="package">last</requirement> <requirement type="package">numpy</requirement> + <requirement type="package" version="1.0">rexdb</requirement> </requirements> <stdio> <regex match="Traceback" source="stderr" level="fatal" description="Unknown error" /> @@ -10,7 +11,7 @@ </stdio> <command> python3 ${__tool_directory__}/dante.py --query ${input} --domain_gff ${DomGff} - --protein_database ${__tool_directory__ }/tool-data/protein_domains/${db_type}_pdb + --protein_database \${REXDB}/${db_type}_pdb --classification ${__tool_directory__ }/tool-data/protein_domains/${db_type}_class </command> <inputs> |