| Previous changeset 0:190175f4e143 (2018-09-27) |
|
Commit message:
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/graphmap commit ba787e88cb93e78516b2fced5b60285d5f033ca3 |
|
modified:
graphmap_align.xml macros.xml |
| b |
| diff -r 190175f4e143 -r 1c6c961851de graphmap_align.xml --- a/graphmap_align.xml Thu Sep 27 15:26:47 2018 -0400 +++ b/graphmap_align.xml Fri Mar 15 13:12:50 2024 +0000 |
| [ |
| @@ -3,6 +3,7 @@ <macros> <import>macros.xml</import> </macros> + <expand macro="xrefs" /> <expand macro="requirements" /> <command detect_errors="exit_code"> <![CDATA[ @@ -40,19 +41,19 @@ <test> <param name="r" value="Loman_E.coli_MAP006-1_2D_50x_first_500_reads.fasta"/> <param name="d" value="E.coli_contigs.fasta"/> - <output name="output" ftype="bam" file="result1_map.bam"/> + <output name="output" ftype="bam" file="result1_map.bam" lines_diff="2"/> </test> <test> <param name="r" value="Loman_E.coli_MAP006-1_2D_50x_first_500_reads.fasta"/> <param name="d" value="E.coli_contigs.fasta"/> <param name="preset" value="illumina"/> - <output name="output" ftype="bam" file="result2_map.bam"/> + <output name="output" ftype="bam" file="result2_map.bam" lines_diff="2"/> </test> <test> <param name="r" value="Loman_E.coli_MAP006-1_2D_50x_first_500_reads.fasta"/> <param name="d" value="E.coli_contigs.fasta"/> <param name="preset" value="sensitive"/> - <output name="output" ftype="bam" file="result3_map.bam"/> + <output name="output" ftype="bam" file="result3_map.bam" lines_diff="2"/> </test></tests> <help><![CDATA[ GraphMap - A very accurate and sensitive long-read, high error-rate sequence mapper @@ -60,4 +61,4 @@ GraphMap is licensed under The MIT License. ]]></help> <expand macro="citations" /> -</tool> \ No newline at end of file +</tool> |
| b |
| diff -r 190175f4e143 -r 1c6c961851de macros.xml --- a/macros.xml Thu Sep 27 15:26:47 2018 -0400 +++ b/macros.xml Fri Mar 15 13:12:50 2024 +0000 |
| b |
| @@ -1,6 +1,10 @@ <macros> <token name="@VERSION@">0.5.2</token> - + <xml name="xrefs"> + <xrefs> + <xref type="bio.tools">graphmap</xref> + </xrefs> + </xml> <xml name="requirements"> <requirements> <requirement type="package" version="0.5.2">graphmap</requirement> @@ -23,4 +27,4 @@ <yield /> </citations> </xml> -</macros> \ No newline at end of file +</macros> |