| Previous changeset 4:a5cb5e374399 (2021-02-04) |
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Commit message:
planemo upload for repository https://github.com/brinkmanlab/galaxy-tools/tree/master/biopython-convert commit cae3bd2f937dee563791707ffb4aab8fe5b7e13b |
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modified:
biopython-convert.xml |
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| diff -r a5cb5e374399 -r 1c71c770bfd4 biopython-convert.xml --- a/biopython-convert.xml Thu Feb 04 01:30:20 2021 +0000 +++ b/biopython-convert.xml Wed Jul 27 19:49:20 2022 +0000 |
| [ |
| @@ -1,4 +1,4 @@ -<tool id="biopython-convert" name="BioPython SeqIO Converter" version="1.0" profile="16.04"> +<tool id="biopython-convert" name="BioPython SeqIO Converter" version="1.1" profile="16.04"> <description>Interconvert between the various sequence file formats that BioPython supports</description> <edam_topics> <edam_topic>topic_0091</edam_topic> @@ -11,7 +11,7 @@ <edam_operation>operation_3695</edam_operation> </edam_operations> <requirements> - <requirement type="package" version="1.0.4">biopython.convert</requirement> + <requirement type="package" version="1.3.3">biopython.convert</requirement> </requirements> <version_command><![CDATA[ biopython.convert -v ]]></version_command> <command detect_errors="aggressive"><![CDATA[ @@ -62,6 +62,9 @@ <option value="tab">tab</option> <option value="qual">qual</option> <option value="gff3">gff3</option> + <option value="yaml">yaml</option> + <option value="json">json</option> + <option value="text">text</option> </param> <param name="split" type="boolean" truevalue="-s" falsevalue="" checked="false" label="Split each record into a different file" /> <param name="info" type="boolean" truevalue="-i" falsevalue="" checked="false" label="Output record information while converting" /> @@ -102,6 +105,9 @@ <when input="output_type" value="tab" format="tabular" /> <when input="output_type" value="qual" format="qual" /> <when input="output_type" value="gff3" format="gff3" /> + <when input="output_type" value="yaml" format="yaml" /> + <when input="output_type" value="json" format="json" /> + <when input="output_type" value="text" format="txt" /> </change_format> </data> <collection name="split_output" type="list" label="Output split per record from ${tool.name} on ${on_string}"> |