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Commit message:
planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/matchms commit f7bab98744e338dcdbdc9cf6f9de287632c76ea2 |
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modified:
macros.xml matchms_filtering.xml |
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| diff -r f814052fbdc5 -r 1f2b13dbc0c8 macros.xml --- a/macros.xml Tue Oct 18 11:01:27 2022 +0000 +++ b/macros.xml Tue Oct 18 13:22:20 2022 +0000 |
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| @@ -3,6 +3,7 @@ <xml name="creator"> <creator> + <yield/> <person givenName="Helge" familyName="Hecht" @@ -44,7 +45,23 @@ The output is a JSON file containing serialized matchMS Scores object. The file can be processed by **matchMS output formatter**. ]]> </token> + + <token name="@HELP_matchms_networking@"> + <![CDATA[ + Documentation + For documentation on the tool see https://github.com/matchms/matchms/blob/master/README.rst + and https://matchms.readthedocs.io/en/latest/. + + **Upstream Tools** + matchMS similarity + + **Downstream Tools** + + The output is a network-graph file that can be visualized using graph visualization software (e.g., Cytoscape). + ]]> + </token> + <token name="@HELP_formatter@"> <![CDATA[ Usage @@ -66,4 +83,12 @@ +----------+-----------+---------+--------+ ]]> </token> + + <xml name="citations"> + <citations> + <citation type="doi">10.5281/zenodo.7178586</citation> + <citation type="doi">10.21105/joss.02411</citation> + </citations> + </xml> + </macros> |
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| diff -r f814052fbdc5 -r 1f2b13dbc0c8 matchms_filtering.xml --- a/matchms_filtering.xml Tue Oct 18 11:01:27 2022 +0000 +++ b/matchms_filtering.xml Tue Oct 18 13:22:20 2022 +0000 |
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| @@ -147,8 +147,5 @@ ]]></help> - <citations> - <citation type="doi">10.5281/zenodo.7178586</citation> - <citation type="doi">10.21105/joss.02411</citation> - </citations> + <expand macro="citations"/> </tool> |