| Previous changeset 8:3ca0f78f1102 (2015-12-15) |
|
Commit message:
Uploaded |
|
added:
gandalfworkflow/Galaxy-Workflow-workflow_gandalf_1_set.ga gandalfworkflow/Galaxy-Workflow-workflow_gandalf_2_sets.ga gandalfworkflow/repository_dependencies.xml |
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removed:
Galaxy-Workflow-workflow_gandalf_1_set.ga Galaxy-Workflow-workflow_gandalf_2_sets.ga repository_dependencies.xml |
| b |
| diff -r 3ca0f78f1102 -r 1fbe965e22e2 Galaxy-Workflow-workflow_gandalf_1_set.ga --- a/Galaxy-Workflow-workflow_gandalf_1_set.ga Tue Dec 15 05:38:37 2015 -0500 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 |
| [ |
| b'@@ -1,384 +0,0 @@\n-{\n- "a_galaxy_workflow": "true", \n- "annotation": "", \n- "format-version": "0.1", \n- "name": "workflow gandalf 1 set", \n- "steps": {\n- "0": {\n- "annotation": "", \n- "id": 0, \n- "input_connections": {}, \n- "inputs": [\n- {\n- "description": "", \n- "name": "Reference genome"\n- }\n- ], \n- "name": "Input dataset", \n- "outputs": [], \n- "position": {\n- "left": 128, \n- "top": 198\n- }, \n- "tool_errors": null, \n- "tool_id": null, \n- "tool_state": "{\\"name\\": \\"Reference genome\\"}", \n- "tool_version": null, \n- "type": "data_input", \n- "user_outputs": []\n- }, \n- "1": {\n- "annotation": "", \n- "id": 1, \n- "input_connections": {}, \n- "inputs": [\n- {\n- "description": "", \n- "name": "Genome reads forward "\n- }\n- ], \n- "name": "Input dataset", \n- "outputs": [], \n- "position": {\n- "left": 157, \n- "top": 295\n- }, \n- "tool_errors": null, \n- "tool_id": null, \n- "tool_state": "{\\"name\\": \\"Genome reads forward \\"}", \n- 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| b |
| diff -r 3ca0f78f1102 -r 1fbe965e22e2 Galaxy-Workflow-workflow_gandalf_2_sets.ga --- a/Galaxy-Workflow-workflow_gandalf_2_sets.ga Tue Dec 15 05:38:37 2015 -0500 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 |
| [ |
| b'@@ -1,933 +0,0 @@\n-{\n- "a_galaxy_workflow": "true", \n- "annotation": "", \n- "format-version": "0.1", \n- "name": "workflow gandalf 2 sets", \n- "steps": {\n- "0": {\n- "annotation": "", \n- "id": 0, \n- "input_connections": {}, \n- "inputs": [\n- {\n- "description": "", \n- "name": "Reference genome"\n- }\n- ], \n- "name": "Input dataset", \n- "outputs": [], \n- "position": {\n- "left": 248, \n- "top": 874\n- }, \n- "tool_errors": null, \n- "tool_id": null, \n- "tool_state": "{\\"name\\": \\"Reference genome\\"}", \n- "tool_version": null, \n- "type": "data_input", \n- "user_outputs": []\n- }, \n- "1": {\n- "annotation": "", \n- "id": 1, \n- "input_connections": {}, \n- "inputs": [\n- {\n- "description": "", \n- "name": "genome 1 reads forward"\n- }\n- ], \n- "name": "Input dataset", \n- "outputs": [], \n- "position": {\n- "left": 280, \n- "top": 979\n- }, \n- "tool_errors": null, \n- "tool_id": null, \n- "tool_state": "{\\"name\\": \\"genome 1 reads forward\\"}", \n- 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| b |
| diff -r 3ca0f78f1102 -r 1fbe965e22e2 gandalfworkflow/Galaxy-Workflow-workflow_gandalf_1_set.ga --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/gandalfworkflow/Galaxy-Workflow-workflow_gandalf_1_set.ga Fri Apr 08 12:17:38 2016 -0400 |
| [ |
| b'@@ -0,0 +1,384 @@\n+{\n+ "a_galaxy_workflow": "true", \n+ "annotation": "", \n+ "format-version": "0.1", \n+ "name": "workflow gandalf 1 set", \n+ "steps": {\n+ "0": {\n+ "annotation": "", \n+ "id": 0, \n+ "input_connections": {}, \n+ "inputs": [\n+ {\n+ "description": "", \n+ "name": "Reference genome"\n+ }\n+ ], \n+ "name": "Input dataset", \n+ "outputs": [], \n+ "position": {\n+ "left": 128, \n+ "top": 198\n+ }, \n+ "tool_errors": null, \n+ "tool_id": null, \n+ "tool_state": "{\\"name\\": \\"Reference genome\\"}", \n+ "tool_version": null, \n+ "type": "data_input", \n+ "user_outputs": []\n+ }, \n+ "1": {\n+ "annotation": "", \n+ "id": 1, \n+ "input_connections": {}, \n+ "inputs": [\n+ {\n+ "description": "", \n+ "name": "Genome reads forward "\n+ }\n+ ], \n+ "name": "Input dataset", \n+ "outputs": [], \n+ "position": {\n+ "left": 157, \n+ "top": 295\n+ }, \n+ "tool_errors": null, \n+ "tool_id": null, \n+ "tool_state": "{\\"name\\": \\"Genome reads forward \\"}", \n+ 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| b |
| diff -r 3ca0f78f1102 -r 1fbe965e22e2 gandalfworkflow/Galaxy-Workflow-workflow_gandalf_2_sets.ga --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/gandalfworkflow/Galaxy-Workflow-workflow_gandalf_2_sets.ga Fri Apr 08 12:17:38 2016 -0400 |
| [ |
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| b |
| diff -r 3ca0f78f1102 -r 1fbe965e22e2 gandalfworkflow/repository_dependencies.xml --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/gandalfworkflow/repository_dependencies.xml Fri Apr 08 12:17:38 2016 -0400 |
| b |
| @@ -0,0 +1,10 @@ +<?xml version="1.0"?> +<repositories description="Gandalf worflow needed repository"> + <repository changeset_revision="d8c9597bfb09" name="bwa" owner="devteam" toolshed="http://toolshed.g2.bx.psu.edu" /> + <repository changeset_revision="74980f9f1ccc" name="mapqfilter" owner="urgi-team" toolshed="http://toolshed.g2.bx.psu.edu" /> + <repository changeset_revision="379fdf4c41ac" name="picard" owner="devteam" toolshed="http://toolshed.g2.bx.psu.edu" /> + <repository changeset_revision="874dd6c0fcde" name="freebayes4workflow" owner="urgi-team" toolshed="http://toolshed.g2.bx.psu.edu" /> + <repository changeset_revision="1fd1f727c330" name="vcfgandalftools" owner="urgi-team" toolshed="http://toolshed.g2.bx.psu.edu" /> + <repository changeset_revision="af65bfb54977" name="suite_samtools_0_1_19" owner="devteam" toolshed="http://toolshed.g2.bx.psu.edu" /> + <repository changeset_revision="79feb4eb7832" name="mdust" owner="urgi-team" toolshed="http://toolshed.g2.bx.psu.edu" /> +</repositories> |
| b |
| diff -r 3ca0f78f1102 -r 1fbe965e22e2 repository_dependencies.xml --- a/repository_dependencies.xml Tue Dec 15 05:38:37 2015 -0500 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 |
| b |
| @@ -1,10 +0,0 @@ -<?xml version="1.0"?> -<repositories description="Gandalf worflow needed repository"> - <repository changeset_revision="d8c9597bfb09" name="bwa" owner="devteam" toolshed="http://toolshed.g2.bx.psu.edu" /> - <repository changeset_revision="74980f9f1ccc" name="mapqfilter" owner="urgi-team" toolshed="http://toolshed.g2.bx.psu.edu" /> - <repository changeset_revision="379fdf4c41ac" name="picard" owner="devteam" toolshed="http://toolshed.g2.bx.psu.edu" /> - <repository changeset_revision="874dd6c0fcde" name="freebayes4workflow" owner="urgi-team" toolshed="http://toolshed.g2.bx.psu.edu" /> - <repository changeset_revision="cfd4eaadad42" name="vcfgandalftools" owner="urgi-team" toolshed="http://toolshed.g2.bx.psu.edu" /> - <repository changeset_revision="af65bfb54977" name="suite_samtools_0_1_19" owner="devteam" toolshed="http://toolshed.g2.bx.psu.edu" /> - <repository changeset_revision="79feb4eb7832" name="mdust" owner="urgi-team" toolshed="http://toolshed.g2.bx.psu.edu" /> -</repositories> |