| Previous changeset 0:4ba3d5fa9163 (2018-05-21) Next changeset 2:b22129de8d8e (2018-06-08) |
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Commit message:
Uploaded |
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added:
mask_sorter.xml |
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| diff -r 4ba3d5fa9163 -r 20b6070cf44b mask_sorter.xml --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/mask_sorter.xml Mon May 21 13:50:54 2018 -0400 |
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| @@ -0,0 +1,36 @@ +<tool id="mask_sorter" name="mask_sorter" version="0.1.0"> + <requirements> + <requirement type="package" version="2.7.14">python</requirement> + <requirement type="package" version="0.22.0">pandas</requirement> + <requirement type="package" version="1.0.0">scipy</requirement> + <requirement type="package" version="1.14.2">numpy</requirement> + <requirement type="package" version="5.1.0">pillow</requirement> + </requirements> + <command detect_errors="exit_code"><![CDATA[ + python /opt/galaxy/tools/VampirePackage/sourcecode/command_sort.py -i "${directory}" -o "$output1" + ]]></command> + <inputs> + <param type="text" name="directory"/> + </inputs> + <outputs> + <data name="output1" format="csv" /> + </outputs> + <tests> + <test> + <param name="directory" value="direc.txt"/> + <output name="output1" file="hi.csv"/> + </test> + </tests> + <help><![CDATA[ + Upload the text file with the path to the folder containing your cell profiler output masks + ]]></help> + <citations> + <citation type="bibtex"> +@misc{renameTODO, + author = {Han, Kyu Sang}, + year = {2018}, + title = {Mr.}, + url = {https://kyusanghan.com}, +}</citation> + </citations> +</tool> |