Repository 'bdds'
hg clone https://toolshed.g2.bx.psu.edu/repos/sjung/bdds

Changeset 4:20bbc86eae21 (2017-05-24)
Previous changeset 3:43e4ba4796c1 (2017-05-24) Next changeset 5:f77a3f2876c3 (2017-05-24)
Commit message:
Uploaded
added:
hint.xml
b
diff -r 43e4ba4796c1 -r 20bbc86eae21 hint.xml
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/hint.xml Wed May 24 00:35:55 2017 -0400
b
@@ -0,0 +1,22 @@
+<tool id="hint" name="Hint" version="HINT: 1.1.1">
+    <description> predicts TFBSs given open chromatin data </description>
+    <requirements>
+      <requirement type="package">pymodules</requirement>
+    </requirements>
+    <command interpreter="python">
+      hint_wrapper.py
+      --input $input
+      --region $region
+      --out-dir $output.extra_files_path
+      --output $output
+    </command>
+      <inputs>
+         <param format="bam" help="" name="input" optional="false" type="data" label="Input BAM"/>
+         <param format="bed" help="" name="region" optional="false" type="data" label="Input BED"/>
+      </inputs>
+      <outputs>
+         <data format="bed" label="${tool.name} on ${on_string}" name="output"/>
+      </outputs>
+      <help>
+      </help>
+</tool>