| Next changeset 1:0f849231e4e0 (2012-03-31) |
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Commit message:
Uploaded |
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added:
bed_window.xml |
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| diff -r 000000000000 -r 21b4cb068fab bed_window.xml --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/bed_window.xml Sat Mar 31 14:05:34 2012 -0400 |
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| @@ -0,0 +1,18 @@ +<tool id="bed_window" name="bed_window"> + <description>make a window around interval center </description> + <command interpreter="python"> bed_window.py $input $output $window </command> + <inputs> + <param name="input" type="data" format="interval" label="Input interval file"/> + <param name="window" type="integer" value="1000" label="window size (bps)" /> + </inputs> + <outputs> + <data format="input" name="output" /> + </outputs> + <help> + +**Description** + +For each interval in the input file, take the middle point, then extend each side windowsize/2 bps. + + </help> +</tool> |