| Next changeset 1:d3c07d270a50 (2019-04-01) |
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Commit message:
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/collection_element_identifiers commit 3e691a225d82f9f79bba80902f385a6b4557ab45 |
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added:
collection_element_identifiers.xml test-data/output.txt test-data/simple_line.txt |
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| diff -r 000000000000 -r 220ee3518f19 collection_element_identifiers.xml --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/collection_element_identifiers.xml Fri Jun 15 04:55:24 2018 -0400 |
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| @@ -0,0 +1,37 @@ +<tool id="collection_element_identifiers" name="Extract element identifiers" version="0.0.1"> + <description>of a list collection</description> + <requirements> + </requirements> + <command detect_errors="exit_code"><![CDATA[ +mv '$cf' '$output' + ]]> + </command> + <configfiles> + <configfile name="cf">#for $el in $input_collection: +${el.element_identifier} +#end for</configfile> + </configfiles> + <inputs> + <param name="input_collection" type="data_collection" collection_type="list" label="Dataset collection"/> + </inputs> + <outputs> + <data name="output" format="txt" /> + </outputs> + <tests> + <test> + <param name="input_collection"> + <collection type="list"> + <element name="e1" value="simple_line.txt" /> + <element name="e2" value="simple_line.txt" /> + <element name="e3" value="simple_line.txt" /> + </collection> + </param> + <output name="output" file="output.txt" /> + </test> + </tests> + <help><![CDATA[ +This tool takes a list-type collection and produces a text dataset as output, containing the element identifiers of all datasets contained in the collection. + ]]></help> + <citations> + </citations> +</tool> |
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| diff -r 000000000000 -r 220ee3518f19 test-data/output.txt --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/output.txt Fri Jun 15 04:55:24 2018 -0400 |
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| @@ -0,0 +1,3 @@ +e1 +e2 +e3 |
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| diff -r 000000000000 -r 220ee3518f19 test-data/simple_line.txt --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/simple_line.txt Fri Jun 15 04:55:24 2018 -0400 |
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| @@ -0,0 +1,1 @@ +This is a line of text. |