| Previous changeset 39:925945cca45f (2017-04-24) Next changeset 41:1ed398538e91 (2017-04-24) |
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Commit message:
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modified:
GRsetFromGEO/GRsetFromGEO.R GRsetFromGEO/tool_dependencies.xml |
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| diff -r 925945cca45f -r 234e990e8e1d GRsetFromGEO/GRsetFromGEO.R --- a/GRsetFromGEO/GRsetFromGEO.R Mon Apr 24 09:29:38 2017 -0400 +++ b/GRsetFromGEO/GRsetFromGEO.R Mon Apr 24 09:45:39 2017 -0400 |
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| @@ -1,8 +1,5 @@ require("minfi", quietly = TRUE) -require("BiocGenerics", quietly = TRUE) -require("data.table", quietly = TRUE) require("GEOquery", quietly = TRUE) -require("rtracklayer", quietly = TRUE) require("FDb.InfiniumMethylation.hg19", quietly = TRUE) args <- commandArgs(trailingOnly = TRUE) |
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| diff -r 925945cca45f -r 234e990e8e1d GRsetFromGEO/tool_dependencies.xml --- a/GRsetFromGEO/tool_dependencies.xml Mon Apr 24 09:29:38 2017 -0400 +++ b/GRsetFromGEO/tool_dependencies.xml Mon Apr 24 09:45:39 2017 -0400 |
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| @@ -269,6 +269,9 @@ <package> https://bioarchive.galaxyproject.org/minfi_1.20.0.tar.gz </package> + <package> + https://bioarchive.galaxyproject.org/GEOquery_2.20.0.tar.gz + </package> </action> </actions> - </tool_dependency> \ No newline at end of file + </tool_dependency> |