Repository 'cpt_protein_blast_grouping'
hg clone https://toolshed.g2.bx.psu.edu/repos/cpt/cpt_protein_blast_grouping

Changeset 4:258afe02e34a (2024-08-08)
Previous changeset 3:c5e0e05ce58a (2024-08-08) Next changeset 5:11701cc63084 (2024-08-08)
Commit message:
planemo upload commit 1098c37fcd6cf35d77748a08aa8b3ee9093c5aea
modified:
protein_blast_grouping.py
b
diff -r c5e0e05ce58a -r 258afe02e34a protein_blast_grouping.py
--- a/protein_blast_grouping.py Thu Aug 08 03:33:45 2024 +0000
+++ b/protein_blast_grouping.py Thu Aug 08 03:52:37 2024 +0000
[
@@ -44,19 +44,12 @@
         top_hits = self.get_top_hits(num_hits, sort_key)
         print(f"# Top {num_hits} Hits", file=output_file)
         print(
-            "{:>4} {:<20} {:>10} {:>10}".format(
-                "Rank", "Phage Name", "Unique Query Matches", "Unique Subject Hits"
-            ),
+            "Rank\tPhage Name\tUnique Query Matches\tUnique Subject Hits",
             file=output_file,
         )
         for rank, (organism, data) in enumerate(top_hits):
             print(
-                "{:>4} {:<50} {:<25} {:<25}".format(
-                    rank,
-                    organism,
-                    len(data["unique_queries"]),
-                    len(data["unique_hits"]),
-                ),
+                f"{rank}\t{organism}\t{len(data['unique_queries'])}\t{len(data['unique_hits'])}",
                 file=output_file,
             )