| Previous changeset 21:7b71d14e0f78 (2014-06-20) Next changeset 23:302ce0e59304 (2014-06-20) |
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Commit message:
Uploaded |
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modified:
tool_dependencies.xml |
| b |
| diff -r 7b71d14e0f78 -r 2680041530ec tool_dependencies.xml --- a/tool_dependencies.xml Fri Jun 20 05:05:25 2014 -0400 +++ b/tool_dependencies.xml Fri Jun 20 06:28:21 2014 -0400 |
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| @@ -1,7 +1,7 @@ <?xml version="1.0"?> <tool_dependency> <package name="samtools" version="0.1.18"> - <repository changeset_revision="171cd8bc208d" name="package_samtools_0_1_18" owner="devteam" toolshed="http://toolshed.g2.bx.psu.edu" /> + <repository changeset_revision="171cd8bc208d" name="package_samtools_0_1_18" owner="devteam" toolshed="http://toolshed.g2.bx.psu.edu" prior_installation_required="True" /> </package> <package name="pindel" version="0.2.5"> <install version="1.0"> @@ -25,7 +25,7 @@ THREADS= COLOUSINGBD15_TIME=60 COLOWOBD15_TIME=80 - SIM1CHRVS20305_TIME=60" >> Makefile.local + SIM1CHRVS20305_TIME=60" > Makefile.local </action> <action type="shell_command">make SAMTOOLS=~/samtools THREADS=2</action> <!-- <action type="shell_command">./INSTALL ~/samtools</action> --> |